Gene
RNA
| Item | Value |
|---|---|
| gene id | G226319 |
| gene name | usp44 |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 7272077 ~ 7272316 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| usp44 | Predicted to enable thiol-dependent deubiquitinase. Acts upstream of or within central nervous system morphogenesis and cranial skeletal system development. Predicted to be located in nucleus. Predicted to be active in cytoplasm. Orthologous to human USP44 (ubiquitin specific peptidase 44). |
| description |
|---|
| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU306969 | True | 240 | lncRNA | 0.61 | 1 | 7272077 | 7272316 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| metap2a | metap2,LOC104945620,LOC102784010,LOC102294382 | coding | upstream | 4627 | 7257270 ~ 7267450 (+) |
| vezt | vezt | coding | upstream | 16192 | 7240852 ~ 7255885 (+) |
| trnaw-cca_35 | NA | coding | upstream | 124737 | 7147269 ~ 7147340 (+) |
| lamb1b | lamb1,LOC103364103 | coding | upstream | 128072 | 7115962 ~ 7144005 (+) |
| dclre1c | dclre1c,LOC106595997 | coding | upstream | 172073 | 7089340 ~ 7100004 (+) |
| pah | pah | coding | downstream | 237648 | 7509964 ~ 7524419 (+) |
| LOC120553155 | pah | coding | downstream | 274112 | 7546428 ~ 7562205 (+) |
| LOC120553589 | parpbp,LOC102779589 | coding | downstream | 320563 | 7592879 ~ 7605838 (+) |
| LOC120553463 | LOC103356656 | coding | downstream | 597445 | 7869761 ~ 7887525 (+) |
| tnnt2c | LOC102777397 | coding | downstream | 623229 | 7895545 ~ 7897483 (+) |
| G226318 | NA | non-coding | upstream | 370 | 7271317 ~ 7271707 (+) |
| G226317 | NA | non-coding | upstream | 1324 | 7269104 ~ 7270753 (+) |
| G226316 | NA | non-coding | upstream | 3319 | 7267509 ~ 7268758 (+) |
| G226306 | ndufa12 | non-coding | upstream | 55691 | 7213392 ~ 7216386 (+) |
| G226292 | eri1,LOC102785739 | non-coding | upstream | 114190 | 7157490 ~ 7157887 (+) |
| G226352 | NA | non-coding | downstream | 62738 | 7335054 ~ 7346162 (+) |
| G226452 | igf1 | non-coding | downstream | 343872 | 7616188 ~ 7707570 (+) |
| LOC120553625 | NA | non-coding | downstream | 619093 | 7891409 ~ 7955485 (+) |
| G226505 | NA | non-coding | downstream | 752045 | 8024361 ~ 8028661 (+) |
| G226507 | syt1,LOC106518246,LOC100695586 | non-coding | downstream | 775463 | 8047779 ~ 8057617 (+) |
| prkcq | prkcq,LOC102789446 | other | upstream | 585438 | 6660520 ~ 6686639 (+) |
| abcc9 | abcc9,LOC107387088 | other | upstream | 1898440 | 5281258 ~ 5373637 (+) |
| G225894 | NA | other | upstream | 2614108 | 4657444 ~ 4657969 (+) |
| LOC120553793 | NA | other | upstream | 3333123 | 3935674 ~ 3938954 (+) |
| LOC120553144 | rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 | other | upstream | 3430903 | 3814481 ~ 3841174 (+) |
| snrpf | snrpf,LOC106576293 | other | downstream | 46201 | 7318517 ~ 7321189 (+) |
| amdhd1 | amdhd1 | other | downstream | 50754 | 7323070 ~ 7332259 (+) |
| klhl42 | klhl42 | other | downstream | 91009 | 7363325 ~ 7368216 (+) |
| nrip2 | LOC102781986,LOC100711207,LOC102191975 | other | downstream | 98126 | 7370442 ~ 7400399 (+) |
| ascl1a | ascl1 | other | downstream | 151302 | 7423618 ~ 7426254 (+) |
