G226452 (igf1)


Basic Information

Item Value
gene id G226452
gene name igf1
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 7616188 ~ 7707570 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU307137
GTATTGTACGTGCATGCTGCATGAAGAAAAACTCTCCAGCCATTTCTGTGATGTTGACAAGTGGTTTATTCAGCAGGAATGGTGAACAAtttgtcagtatttttttttctacagaaGGCAATCGAGCACCATGAATAACAGCGCTGTAATCAAACAGTTTCTTGGACTTCTCAGGAAATGACATTTTCTCATTAAACACCTCACAGAGTGGTGAATCTCTCACTCCCACATTTTAGACTTTATTGATTTATATTTCACACAAGTGACAGAGTGTTTGAATGATTCATAGTCAACATGATTTAAAGTTGCTGCAGCTTTCTTAAAAAACAGATACACAGAAAGGGACTTTTGTCTGTCTCACTTCACTATGCATTACATTATAAGCTGTTACCAGATACAGTGTGTGAATTGATGTCTTTggtttgtactgtatatctgaaAATCTGGGGGAACCGGAGTGGTTCTACATCCagcttatttttatttcagccgCCAGGCCGACTGGTAATATAATTTGTAAGGAATAGACACCAAAGTAGGCTGCATATGTTGATCATTATTATCATACAgataaaaacacacttttaaattAATCGGTGAAAATAAGTTTGAATTCAGAGAGCTTCTAACAAATGTTTTGgtcaaaataaattaaactccTGGCTTATTCCTAAAATGAGACTTTGAAACATTCTGAGGGAATAACACATTCTTCCTCTAACAAATTAATTCATAAGCAACAAAACGCACCATTGCTCAATTCAGCATAGTGGCAATTCAATTTTGCCACTATAGCCTTaattggtctggtatgaccagtagcttgtgcaggctaatgttagctaacgttagcaaacttaaaggaaaagtttgacatttagggaaatacgcttatttgcaTTCTTGCCCAGACTTAGATGAGAATATTGATAACACGCTCATATCTGTAGGCTACATATCAAGCTACAGCCAGAAGCCAGTTGGCTTAGCCTATCATAACTAATGGAAATGGGGAAACGGCTTACTTGGCTATCTTGCCAACTAGCACTTCTaaaatcttgtttgtttaaaaaacaaaacaaaaaaaaaaaacctaatgtGTCACTTCTTGTGTTATtttgtgagctttagaggtgccgGTAGGTCGATTTTGTTGACTTTGCACAAAGTCAGGCAAGGTGAGCTTTCTTGTTTCcactttttgtgctaagcttAGCTTGATcttctcagcaagaaagtgaatttcccaaaatgtcaaactattcctttaagctaGACACTGTGTGACATTAATGAGTACATTTTCTGATATTATGGTTGTTGTCTACTTGTGCTCCTGTTACACTCCATTTCAGTGTGTCACAGCTGAAAAAATAATGTTGTCTGACTCACGATAATCTTGGGAAATGAAGGCAAATGTTTTATGCCATTATCCTGTAATTACCACTTGTAGCCACAGTGGCCGCTGTTCAGCAAAAGTTACGTAGTCTCGCGTTAAGCGTTTTTAATAATCAATACCTTGGCTTCCAGCGAggtgcatgtacacacacacatctcaggaCAGACAAAAGCACACCATGACTTTTAACAATCTTAATACAATTGGAAGAACCACAGTTCACAGTACTTTTGTCAAGTTATTTGGCATAAGGGATCTAtattgagaaaataattcaaaaacAGTAGAAAAAATAGCATTTTGCCTTCTTGGGACCACAACatgatattttcttttttttttatctccatgCATTCACAGATTTCACACAGATACATTTACTCGCTTACAATACTACCTTATTGAAACAGcttacaaataaaaacactattaaaATGGTGGCCACAAGGCTGTGCAAAAGGGAAGACCTCCAATGTAAGCCCTGCCATCTGTCTGTATCAGCCATCTCTTGCAAGTAACAAACTACAAAATAGCACCATTATACAGTGGATAGGATTCTTAATACAGTTTTGTTATATGAAACCATCATGTACAATGAATGATAGGTATGCATAGGTTAACATAAATGGGAGTACTGTTTGATTATACACAGGTAGAGGAGGCAGAGATGAGATGTCTTGGGTGGTTTGTGCAATACAATTACTGTAAAGCCGCATGGAGGCTTGAACAAACAGCCGTGACTGTCAGCCCTCATGCAAGGACTTCTCAGAACCGGCTTTTcatgaaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgt
>TU307138
GTATTGTACGTGCATGCTGCATGAAGAAAAACTCTCCAGCCATTTCTGTGATGTTGACAAGTGGTTTATTCAGCAGGAATGGTGAACAAtttgtcagtatttttttttctacagaaGGCAATCGAGCACCATGAATAACAGCGCTGTAATCAAACAGTTTCTTGGACTTCTCAGGAAATGACATTTTCTCATTAAACACCTCACAGAGTGGTGAATCTCTCACTCCCACATTTTAGACTTTATTGATTTATATTTCACACAAGTGACAGAGTGTTTGAATGATTCATAGTCAACATGATTTAAAGTTGCTGCAGCTTTCTTAAAAAACAGATACACAGAAAGGGACTTTTGTCTGTCTCACTTCACTATGCATTACATTATAAGCTGTTACCAGATACAGTGTGTGAATTGATGTCTTTggtttgtactgtatatctgaaAATCTGGGGGAACCGGAGTGGTTCTACATCCagcttatttttatttcagccgCCAGGCCGACTGGTAATATAATTTGTAAGGAATAGACACCAAAGTAGGCTGCATATGTTGATCATTATTATCATACAgataaaaacacacttttaaattAATCGGTGAAAATAAGTTTGAATTCAGAGAGCTTCTAACAAATGTTTTGgtcaaaataaattaaactccTGGCTTATTCCTAAAATGAGACTTTGAAACATTCTGAGGGAATAACACATTCTTCCTCTAACAAATTAATTCATAAGCAACAAAACGCACCATTGCTCAATTCAGCATAGTGGCAATTCAATTTTGCCACTATAGCCTTaattggtctggtatgaccagtagcttgtgcaggctaatgttagctaacgttagcaaacttaaaggaaaagtttgacatttagggaaatacgcttatttgcaTTCTTGCCCAGACTTAGATGAGAATATTGATAACACGCTCATATCTGTAGGCTACATATCAAGCTACAGCCAGAAGCCAGTTGGCTTAGCCTATCATAACTAATGGAAATGGGGAAACGGCTTACTTGGCTATCTTGCCAACTAGCACTTCTaaaatcttgtttgtttaaaaaacaaaacaaaaaaaaaaaacctaatgtGTCACTTCTTGTGTTATtttgtgagctttagaggtgccgGTAGGTCGATTTTGTTGACTTTGCACAAAGTCAGGCAAGGTGAGCTTTCTTGTTTCcactttttgtgctaagcttAGCTTGATcttctcagcaagaaagtgaatttcccaaaatgtcaaactattcctttaagctaGACACTGTGTGACATTAATGAGTACATTTTCTGATATTATGGTTGTTGTCTACTTGTGCTCCTGTTACACTCCATTTCAGTGTGTCACAGCTGAAAAAATAATGTTGTCTGACTCACGATAATCTTGGGAAATGAAGGCAAATGTTTTATGCCATTATCCTGTAATTACCACTTGTAGCCACAGTGGCCGCTGTTCAGCAAAAGTTACGTAGTCTCGCGTTAAGCGTTTTTAATAATCAATACCTTGGCTTCCAGCGAggtgcatgtacacacacacatctcaggaCAGACAAAAGCACACCATGACTTTTAACAATCTTAATACAATTGGAAGAACCACAGTTCACAGTACTTTTGTCAAGTTATTTGGCATAAGGGATCTAtattgagaaaataattcaaaaacAGTAGAAAAAATAGCATTTTGCCTTCTTGGGACCACAACatgatattttcttttttttttatctccatgCATTCACAGATTTCACACAGATACATTTACTCGCTTACAATACTACCTTATTGAAACAGcttacaaataaaaacactattaaaATGGTGGCCACAAGGCTGTGCAAAAGGGAAGACCTCCAATGTAAGCCCTGCCATCTGTCTGTATCAGCCATCTCTTGCAAGTAACAAACTACAAAATAGCACCATTATACAGTGGATAGGATTCTTAATACAGTTTTGTTATATGAAACCATCATGTACAATGAATGATAGGTATGCATAGGTTAACATAAATGGGAGTACTGTTTGATTATACACAGGTAGAGGAGGCAGAGATGAGATGTCTTGGGTGGTTTGTGCAATACAATTACTGTAAAGCCGCATGGAGGCTTGAACAAACAGCCGTGACTGTCAGCCCTCATGCAAGGACTTCTCAGAACCGGCTTTTcatgaaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgaacctTACTCACAGTTACACAACTCTCATTTACACTGTGgttgttttgtatgtgtgtttttgtagttATATGTGTGCTGCATCTCATATCTCCAGGAAGACTTGTCATTTTGGTTTGCAATATTTACCAAATCATTTCATCTGCATGTTTCTCCAGTGGACTTTGCAACAGATGCTGTGGATTTTTGTTGTACTCTCGCCATGATGGCAGATAATGCGGTCCAAGCGACAACTGAAGTAGCAAAGTTCTCGGCCTCCCTAAAAGAACAAAATATAACAGGCCGAGATCGATCAATCGTTTTAACTTCCCATCTACGTGGCTATTCTTAAGAGTCTCTCCTTCTCTTGCTTCAAATTTAAGTGTTGACAGATTTGGGAACATATTGTTAGTTCTTTAAgggaacagaagaaaaaaatctctttttagAGCGCTTGTTGACTTGCTGTAACTAAACTTTCATGACTTGCACTAAACCTTGAACAAAGGCCTCCACTCAGACGCAAATGTTGATCACCAGTTACTGGATTGTTGACAAAAATCAGATTTGGCCACAACAAACATTTTGCCTGATTGTTGCTATTTGACTTATTCCACTGACTTATGCCAAATGCACTTTGAATCCACTGAATGACCCATTTTTTGCAACCAAACAAGCACCGTGCACTGACTGGCCAAAAGACCTTAATTCAATTTAGCTTCTGATTAATTCGTTTCTCAATCTTGGTTTTATACTTCCCACCTTCCTTAAAATCCCCTCTAATGGTGCTTGATCTGTTGTTATAGAAGTCCGTCCTCAGGTTCTCAACACTTTCCGAGGCTTAGGAGGGATTTGGATTGGACACAAACCTTCAAGGGACTCCACTTAGACAGACAATCTCTGCCTTCAGGAGTCCACGAGAAGTAGGGATTTGGGCTCAAAGtaaaataactataacaatattGAAAGTCTGATAATGAACCACCTGGTCTTTGTCCTTTGAAGCAAAACCTTGTTTTTACCTATTAAAAATATCCGCAGTAATGCATAGTGCTTAAAAACAAACTCAGATTTTAACTGGGGTAGAAACTGTTATATGTGACCGGTGACAAAGTATCCTGTCTAACTTAGTGAATGAATCCACTCTCTCAGACTGAAAGGATTTACCTCCGCAAAGTTCAGGGGACAGGATGGACCACTCATTCTCAAACATAGCCTGTCGCTCACGGATAGGCTGAAGCACAGATCCGTTCCCACCTTTCCTGGAGCCAGGGGATGCTGCAGCTCACACATGGAGGTACAATAAGCTCGTTTGTGTCTCAGCAGCTAAACTAGTCTGTTACATTGCATTAACAAAGAATTCTTCCCGATATGGAATGGTGCAGTGTATAAAATAATCACAAGATCCCTCATCAAACCCTTAAACACCACTTAGCTCTCAGGTTTCAATCATTTTGAAGAGCTTTTCGGACCTTTGTTAgcattctttttgttttgttttacagtgAACCATTCCACAGGGGTACCAGGTAAGGCCACTCCCTTCTCTCTTCCCAAGTCGCTGGGCATTTGTCCATTCCTTCTTTCCCTACATTCGGTAATTTCTGCCCCCAGTGTTGCCTCGACTTGAGTTTTTCTGATGAACTTcCTTGAAGGATGAATGACTATGTCCAGGTAAAGGTCTCTTCTTGTTTTTTGTCTTGTCTGGCTGCTGTGCTGTCCTACGCTCTGTGCCCTTGTCCACTTTGTGCCCTGCGGTACTAACCTTAGGTGCTCTCGGCATATCTGTGTGGCGCTGTGCACGCACAGAGCGAGCAGCCTTGCTAGTCTTGGCAGGTGCACAGTACATCTCCAGGCGCCGCAGCTCACAGCTTTGGAAGCAGCACTCGTCCACAATGCCACGTGACCGCCGTGCATTGGGGCCATAGCCTGTTGGTTTA

Function

symbol description
igf1 Enables insulin-like growth factor receptor binding activity. Acts upstream of or within dorsal/ventral pattern formation and positive regulation of cell population proliferation. Predicted to be located in extracellular space. Is expressed in several structures, including digestive system; eye; female organism; musculature system; and solid lens vesicle. Human ortholog(s) of this gene implicated in several diseases, including acne; artery disease (multiple); diabetes mellitus (multiple); myopia; and neurodegenerative disease (multiple). Orthologous to human IGF1 (insulin like growth factor 1).

NR:

description
insulin-like growth factor I precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307137 False 2235 lncRNA 0.37 2 7616188 7707570
TU307138 True 4167 lncRNA 0.40 3 7616188 7621731

Neighbor

gene id symbol gene type direction distance location
LOC120553589 parpbp,LOC102779589 coding upstream 10350 7592879 ~ 7605838 (+)
LOC120553155 pah coding upstream 53983 7546428 ~ 7562205 (+)
pah pah coding upstream 91769 7509964 ~ 7524419 (+)
metap2a metap2,LOC104945620,LOC102784010,LOC102294382 coding upstream 348738 7257270 ~ 7267450 (+)
vezt vezt coding upstream 360303 7240852 ~ 7255885 (+)
LOC120553463 LOC103356656 coding downstream 162191 7869761 ~ 7887525 (+)
tnnt2c LOC102777397 coding downstream 187975 7895545 ~ 7897483 (+)
ppfibp1a LOC103362093,LOC102299773,LOC102192229 coding downstream 270507 7978077 ~ 8012811 (+)
myf6 myf6 coding downstream 754754 8462324 ~ 8464094 (+)
myf5 myf5 coding downstream 761091 8468661 ~ 8471034 (+)
G226352 NA non-coding upstream 270026 7335054 ~ 7346162 (+)
G226319 usp44 non-coding upstream 343872 7272077 ~ 7272316 (+)
G226318 NA non-coding upstream 344481 7271317 ~ 7271707 (+)
G226317 NA non-coding upstream 345435 7269104 ~ 7270753 (+)
G226316 NA non-coding upstream 347430 7267509 ~ 7268758 (+)
LOC120553625 NA non-coding downstream 183839 7891409 ~ 7955485 (+)
G226505 NA non-coding downstream 316791 8024361 ~ 8028661 (+)
G226507 syt1,LOC106518246,LOC100695586 non-coding downstream 340209 8047779 ~ 8057617 (+)
G226515 NA non-coding downstream 552763 8260333 ~ 8306828 (+)
G226554 NA non-coding downstream 634060 8341630 ~ 8408659 (+)
LOC120553156 LOC104945813 other upstream 46885 7566655 ~ 7569303 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 84111 7525892 ~ 7532077 (+)
ascl1a ascl1 other upstream 189934 7423618 ~ 7426254 (+)
nrip2 LOC102781986,LOC100711207,LOC102191975 other upstream 215789 7370442 ~ 7400399 (+)
klhl42 klhl42 other upstream 247972 7363325 ~ 7368216 (+)
rps16 rps16,LOC103382554 other downstream 719065 8426635 ~ 8432697 (+)
lhfpl3 lhfpl3,LOC101483460 other downstream 1427024 9134594 ~ 9173220 (+)
ndufb2 ndufb2,LOC102790702 other downstream 1529656 9237226 ~ 9241349 (+)
G227121 kera other downstream 2989684 10697254 ~ 10699718 (+)
G227141 dcn,LOC103382665 other downstream 3024499 10732069 ~ 10737503 (+)

Expression


Co-expression Network