G226748


Basic Information

Item Value
gene id G226748
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 9016073 ~ 9016275 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU307545
gtgtgttccaacaatacttttatacaagcAGAGGGGTTGTAAGTAACCCAGgaaagttggaacacctgtgggaattggtagcaccaactttcaaagcttgatcaacctccattgctgcagaacagcctctacattgttaacccatttcttgttccctgaaaaaggcctttttgtaaatgtctgggtagcttgtgaatttcacc

Function

GO:

id name namespace
GO:0004112 cyclic-nucleotide phosphodiesterase activity molecular_function
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity molecular_function
GO:0008081 phosphoric diester hydrolase activity molecular_function

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU307545 True 203 lncRNA 0.42 1 9016073 9016275

Neighbor

gene id symbol gene type direction distance location
LOC120553653 fgf6,LOC100708453,LOC101478942,LOC103358103 coding upstream 5886 9006558 ~ 9010187 (+)
LOC120553730 LOC103358107,LOC100702291,LOC101477928 coding upstream 83096 8927072 ~ 8932977 (+)
atp6v1e1b LOC100708725,LOC104926722,LOC103358108,LOC106937970,LOC103156918,LOC106914460 coding upstream 89277 8918234 ~ 8926796 (+)
gnptab gnptab coding upstream 171048 8818570 ~ 8845025 (+)
washc3 ccdc53 coding upstream 208903 8802548 ~ 8807170 (+)
fgf23 fgf23 coding downstream 811 9017086 ~ 9020129 (+)
llph llph coding downstream 70898 9087173 ~ 9089548 (+)
guca1a LOC103358093,LOC102788764 coding downstream 100530 9116805 ~ 9119985 (+)
LOC120553346 ergic2 coding downstream 251923 9268198 ~ 9273908 (+)
cd36 NA coding downstream 657716 9673991 ~ 9679815 (+)
G226747 NA non-coding upstream 172 9015615 ~ 9015901 (+)
G226717 NA non-coding upstream 2427 9012843 ~ 9013646 (+)
G226716 NA non-coding upstream 3411 9012142 ~ 9012662 (+)
LOC120553611 NA non-coding upstream 72536 8941841 ~ 8943537 (+)
G226720 NA non-coding upstream 80522 8935050 ~ 8935551 (+)
G226755 NA non-coding downstream 21498 9037773 ~ 9039826 (+)
G226810 NA non-coding downstream 162864 9179139 ~ 9204451 (+)
G226885 NA non-coding downstream 634972 9651247 ~ 9654254 (+)
G226918 NA non-coding downstream 735669 9751944 ~ 9754116 (+)
G226921 mtpn non-coding downstream 780198 9796473 ~ 9826525 (+)
rps16 rps16,LOC103382554 other upstream 583376 8426635 ~ 8432697 (+)
LOC120553156 LOC104945813 other upstream 1446770 7566655 ~ 7569303 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 1483996 7525892 ~ 7532077 (+)
ascl1a ascl1 other upstream 1589819 7423618 ~ 7426254 (+)
nrip2 LOC102781986,LOC100711207,LOC102191975 other upstream 1615674 7370442 ~ 7400399 (+)
lhfpl3 lhfpl3,LOC101483460 other downstream 118319 9134594 ~ 9173220 (+)
ndufb2 ndufb2,LOC102790702 other downstream 220951 9237226 ~ 9241349 (+)
G227121 kera other downstream 1680979 10697254 ~ 10699718 (+)
G227141 dcn,LOC103382665 other downstream 1715794 10732069 ~ 10737503 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other downstream 1932010 10948285 ~ 10986201 (+)

Expression


Co-expression Network