G226800


Basic Information

Item Value
gene id G226800
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 9037771 ~ 9039857 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU307611
ATCAATCATACTGTGCACCTGAAGCACTGCTTACTATTTATGCTGAAAAGTGTTGGCCAAGAGTGGGCTGGGCCTGCTCACAGAGGAAGAGCATGAGGGGCTTTGAGGTCTGGAGCAGCGGCTACTGTTAAAGGTTAACACAGAGGACAAGGTCCGTTATTAAGGTATTGATTTCACTGCCATATCCACAGAACAGTAGAGTATGTTAATAGGACAATATTCAGTGAGGCTACTTTCTTATTTTGTTCTTGGTCTAGCTCCTACATGTTAGAGAGAGTTTAGTAGATGGTTTGCAGGTGATTTAATCCTCAGCTAAGTAGTACAGATGTCATGTTACTTGAGGAAAAGGAGCTttggcaagttttttttttaccaggttCGAGAAGAAATCGATGCAGGTTGAAAGGGTTCTTGTAAGGTTTTTTGGAAAAGAAACGCATGTGGAAAGTGGAGGATGCTAGAAGTCTGGATTGATGAATGATAGGAAATTGTCGAGGAAGTTAACTTAAGCTATGTAATGTTTCTGCAGTTTCACTATACTTGAGTGACACACAGGAGGAAGAAGAATCCCCGGTGATGTCCGGCGGGACGGGGATCAGATTAGTTGTGCTGCAGTTTCTCCTGTTATCAATTTCACCATAAACTTTTTTGAGAGTGGGCGACATGGAAAAATATTTatgcacttttaaaaacacactcCTTAAGGAGGGTAAGAGGATGGTGGTTGTGGAGAGTTCAGTTGGTTGTTagggtcttttctttttttagtttttctgtaagttatttgattcttatttttatttttttttttttctgggctgGATTCCCATGGGGTGATGCACATTGTCTTGAAAGCTATGCCCAGGTGAGTAGACGTAGGATAATTGGTgttataatataatagtatataAACTAAGGAAATCCAAGTCACTTGTAGACTCTTTTGGATTCAGTGCGCCTTACTTGAATTTTTGTTAATTCATAGCCAAAACCTTCCAATAGTTCTTTCAAAGAGTTACACGCATACTTTGTCCTAAATATTCTTGTTcatgttttttgcttttttttttttttttaatataaactgCTCTCTGAACTGAAGTTTTAAAAGTGAGTTTTCTCCTTTTATAGACATGGGTAGATAGGGGTTTACATGGTGGAAACGTTTTGACTGTATATAACAACCAATTAGCAgaaatgttgaaaagtcattACAGAAATTTAGTTTCTAAATTGTATTCATGCATGTTGTGCAGAAAGCCAAATGCTTTACCAAAAAAAGTgctttaaacagaaaaaaatgtttatgcTTTTAAAGGCTTTGTGTataatttgaaaaataattCCAAAGTGAGAAAACTAGATTATACTCATCATTCTCTTGCTGCTATTAAGCATTTCTTTTCTAGTCTTACACAAAGATGCCTTATTGTAATTCACTTGTGTGCTGCTATATTACGAAATGTTCTATAACTTGTCTTCTTAGCTTTTGTATGTGTACTGGAGGGAACGTAACTGTTTGGTGCGGGACTGGAAGTACTTGTTTTTGCCGATCTTTTTGATTAgcatgttttattctttttattgtttcatttgtatttttactttataTTCTACCATATTCTTGCTGCTTctttgtaatgtttgtgtacCTCAGGTTAATTTGGACGGATAGAGCGAGAGCCCAACTTTACCTCATCAAACTTCACATCACACACGTCGGTTTTACTCTGAATTTGTTGGAcgggtttcactttttttctgtctagATGAGAGGAAGGATGATGATTCTTCTCTTTAAATCAAATAACTGCCGCCAGATTACACTGAGCAGTTATAAGTGCCTACACTTTAAAATGGGTTATTTCAtatcaaagtttaaaaaaaaaaaagtaatttgcgTGTTAATCAGTTCATTTAAACAAGGTGGaacattgtttatttttgaGGTACCCATTTAGTCAAAGTTTAAACCACGAGAATGTTTTTATCATTGTTCAGTGTGGTTGTTTTTCCAAACTCCTCTTTCATTATCCCCATGTGCAACCACACAGTGTACCTCAACAATTGCTCCTCAATAAATTGGC

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko05166 Human T-cell leukemia virus 1 infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU307611 True 2087 lncRNA 0.36 1 9037771 9039857

Neighbor

gene id symbol gene type direction distance location
tigarb NA coding downstream 1062 9032235 ~ 9036709 (-)
LOC120553610 NA coding downstream 51846 8982705 ~ 8985925 (-)
LOC120553608 galnt8,LOC103358106 coding downstream 86283 8935657 ~ 8951488 (-)
si:ch211-214j24.14 LOC104950099 coding downstream 121230 8909406 ~ 8916541 (-)
spic spic,LOC102783824 coding downstream 133785 8901551 ~ 8903986 (-)
LOC120553659 ccnd2,LOC100707642 coding upstream 181 9040038 ~ 9054300 (-)
usp18 NA coding upstream 34770 9074627 ~ 9083949 (-)
pex26 pex26 coding upstream 44224 9084081 ~ 9087133 (-)
hcls1 LOC106957547,LOC106924663,LOC103140207,LOC104950087,LOC103358095 coding upstream 49869 9089726 ~ 9095823 (-)
golgb1 NA coding upstream 56667 9096524 ~ 9114986 (-)
G226797 NA non-coding downstream 8401 9029046 ~ 9029370 (-)
G226787 NA non-coding downstream 67873 8969389 ~ 8969898 (-)
G226711 atp6v1e1,LOC103382684,LOC100708725,LOC103358108,LOC108233293,LOC101477634 non-coding downstream 114827 8918491 ~ 8922944 (-)
G226658 rps16,LOC103382554 non-coding downstream 607865 8426737 ~ 8429906 (-)
G226654 NA non-coding downstream 680333 8349117 ~ 8357438 (-)
G226803 LOC103358093,LOC102788764 non-coding upstream 76953 9116810 ~ 9119971 (-)
G226917 NA non-coding upstream 702147 9742004 ~ 9742560 (-)
G227019 NA non-coding upstream 1178229 10218086 ~ 10220450 (-)
G227020 NA non-coding upstream 1181099 10220956 ~ 10284085 (-)
G227021 pacsin2,LOC102778832 non-coding upstream 1183637 10223494 ~ 10225897 (-)
dram1 dram1 other downstream 223331 8809393 ~ 8814440 (-)
ppfia2 ppfia2 other downstream 243861 8565242 ~ 8793910 (-)
G226495 LOC103356655,LOC105934024 other downstream 1146460 7888571 ~ 7891311 (-)
LOC120553151 LOC107386793,LOC104950937 other downstream 1543464 7422165 ~ 7494307 (-)
usp44 usp44,LOC102783730 other downstream 1759447 7269037 ~ 7278324 (-)
G227082 anks1b other upstream 1473637 10513494 ~ 10522962 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other upstream 1940341 10980198 ~ 10981259 (-)
hgfa LOC103365344,LOC104958230 other upstream 2418724 11458581 ~ 11482578 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other upstream 2577498 11617355 ~ 11676832 (-)
cracr2ab LOC102301749,LOC103365394 other upstream 2797391 11837248 ~ 11848941 (-)

Expression


Co-expression Network