G226810


Basic Information

Item Value
gene id G226810
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 9179139 ~ 9204451 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU307627
ctcagatgtagagcatgtcagctagctaactctagagacagtaaaagaaagcctgtttcttcaactttggtcagttacaaggcaggattagctgggagacttctaaatgagggcgcacatGTAGAAGAAAGCTGAGCGGATATTCATCAAAGAAGCTGTCAGCTGCCCAAATTCTCCCAGAGACACATGACAAGACAAGTTGTATAAAACTGTCATTACAGTGATTTATTATAATGAACCATGAAAATAGCCAACCAGTGCAGTGTCTGTGAGTCTCTCCctccacacaaacatacacacacacacacaaataataaaaagacaaaGTTGAAAAGTccagagaggggggaaaaaataaaataaaagtaatgctACAGTCACAGAAACATTCAGCTTTGCAAAGAAGAGCGTTCATATTTACAACAATATTTCAAAAATGGGATGGGAGCAAATTGTACAAgcatagaaaagaaaagaagcaaaTATTTACAACCTGTTCCTGGTGAAAGCTGGAGTAACCACCtatacattaaattacattttctacAAATAACCATTGATATTCAAAAATAAACCGCTAACGTTCTACCTGTGGCCGAGACCACTTTGCCTACCTCAGAAGACTACAAGCACTCATTACAAGAAATCGCACACTTTCCTCCTTTAAGCAGACATACTCTTTCACACCCAcGCAGGCTCCCAGAAAAGGGTCttttctgaatctgcagcgGTGAACAGATATTTGTTGTTAgacagaggaataaaaaaaataagtgtttttttctctataCAAAAAGCTTTATCTTTGCTATAATGAGCCACtagattaaaacaaataaatggtGTAGAGAGCCGACAACAGACGAGAGAATTGGAAGTAAAAGGAATAAGTGAcaaagaaggaagaggaggagagagagagggcataGAGGCTGGAATGTCCATTGATAAACAAAAGTGCGGGGCCTTACAACGGGAGTCCAAACAAGACACAGAACAAGATCTTTCCGCTCCATCACATGAAGGATATATAAAAACTAACGGAGGCCAGAGAGAGAGGGCTATGAGCACCGGGGAGATTGTCCATCTTCAGATTCATACAGTTTGTCTAGAAGATCATTTTACAGTCCTTTTTTCTAGATTTTTCtgtccatgttattttttttttttttaaaaagcatccATTTATCccacaatcagctgtttttccactGGCCATGTGTTCAGGTATATAGAAAACATATCTACAGCTTATGATACACGCCCCTCTCGAGCTGAGTTCTCAGGGGTTGCCGGGGGCTGTCAGCAGAGAGGGCGGTCAGTGCCACCCTGTGCTCAGGTACCCCGAGCTGTGAAAGGGGGTCGAGGACGCAGGAGCTCCACGAGTCCCAGAAGGCATCTGGGAGGCAGCGGCCTGGGCCTGGCCTTGTTGAGTCTgttggggaggaggagggggaggtggaGGCAGTCCAGTCTGCTGAAGGGGTGGGGGGTACGTCGATGGGGCCACTGAAGGGTTAGTGGCGGCACCTGGGTGCAACAACGCCGGCTGAAAAGCCCCTAAGTTCTGAAAATGGTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307627 True 1581 lncRNA 0.44 4 9179139 9204451

Neighbor

gene id symbol gene type direction distance location
guca1a LOC103358093,LOC102788764 coding upstream 59154 9116805 ~ 9119985 (+)
llph llph coding upstream 89591 9087173 ~ 9089548 (+)
fgf23 fgf23 coding upstream 159010 9017086 ~ 9020129 (+)
LOC120553653 fgf6,LOC100708453,LOC101478942,LOC103358103 coding upstream 168952 9006558 ~ 9010187 (+)
LOC120553730 LOC103358107,LOC100702291,LOC101477928 coding upstream 246162 8927072 ~ 8932977 (+)
LOC120553346 ergic2 coding downstream 63747 9268198 ~ 9273908 (+)
cd36 NA coding downstream 469540 9673991 ~ 9679815 (+)
chrm2a chrm2,LOC103140231,LOC106927335,LOC100534441,LOC102208075 coding downstream 748149 9952600 ~ 10029904 (+)
LOC120553071 NA coding downstream 896245 10100696 ~ 10103605 (+)
LOC120553783 LOC104962829,LOC102309285,LOC102208629,LOC100697441,LOC102795594,LOC101464871 coding downstream 900480 10104931 ~ 10107801 (+)
G226755 NA non-coding upstream 139313 9037773 ~ 9039826 (+)
G226748 NA non-coding upstream 162864 9016073 ~ 9016275 (+)
G226747 NA non-coding upstream 163238 9015615 ~ 9015901 (+)
G226717 NA non-coding upstream 165493 9012843 ~ 9013646 (+)
G226716 NA non-coding upstream 166477 9012142 ~ 9012662 (+)
G226885 NA non-coding downstream 446796 9651247 ~ 9654254 (+)
G226918 NA non-coding downstream 547493 9751944 ~ 9754116 (+)
G226921 mtpn non-coding downstream 592022 9796473 ~ 9826525 (+)
G226922 NA non-coding downstream 601791 9806242 ~ 9806602 (+)
G226930 LOC104947167 non-coding downstream 663124 9867575 ~ 9868085 (+)
lhfpl3 lhfpl3,LOC101483460 other upstream 5919 9134594 ~ 9173220 (+)
rps16 rps16,LOC103382554 other upstream 746442 8426635 ~ 8432697 (+)
LOC120553156 LOC104945813 other upstream 1609836 7566655 ~ 7569303 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 1647062 7525892 ~ 7532077 (+)
ascl1a ascl1 other upstream 1752885 7423618 ~ 7426254 (+)
ndufb2 ndufb2,LOC102790702 other downstream 32775 9237226 ~ 9241349 (+)
G227121 kera other downstream 1492803 10697254 ~ 10699718 (+)
G227141 dcn,LOC103382665 other downstream 1527618 10732069 ~ 10737503 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other downstream 1743834 10948285 ~ 10986201 (+)
G227216 NA other downstream 1898385 11102836 ~ 11112905 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_027329 NA non-coding NC_007115.7 CM002888.2 22424450 ~ 22426637 (+)