G226885


Basic Information

Item Value
gene id G226885
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 9651247 ~ 9654254 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU307747
ttttaatagcagggtgCACACATTCAACTCCATGAGCACATTTTGAAAACATTCGTCATTACCAGGCTCTTATGGCTAATTtgttggaaataaataaatggaccaCTTTTTAGAACATTTTCTATCAAATGCTGCCAATCTTACCAGCGTATTCTGGGTAGCAGATGGTTAGAGGACTCTTCTTGATCTTCTCCTCAAACAGGTCCTTCTTGTTGAGGAAGAGGATGATGGAGGTGTCTGTGAACCACTTGTTGTTGCAGATGCTGTCGAACAGCTTCATACTCTCGTGCATTCGGTTCTGATGGGGGGAAAAGGAAGATGACGTCCATCACTGTGCTTTGCTCACTGATGCATACACTGTacgtggaaaaaaaaatcttgaacaGAGGCCATCCTTAATTTCTACTTCTCTGACCCGTCACGATTCTAGTAAACAGAGACCAAGTTCCCGCTGCGCAGGAACACAGAGTGCCTGCTATTCTGTTTTTCCGTGAGTCAGAGGCTGAAGCACTCACCATCTCCTCGTCCTCAGCCAGCACCAGGTCATAGTCACTGAGGGCCACGCAGAAGATGATGGCGGTCACACCCTCAAAGCAATGGATCCACTTCTTCCTCTCAGACCGCTGACCGCCAACATCAAACATTCTGGAGGGGGAGTGACATAAGTAAACATGTTCCTCATGTGTGCAAACATACATGCACAATGCAAGCAGTGTTTATGCAAACCcaaaggcaaaaaaataaatggaagaGTCGTGGCTGGTCTCGCTGCATTGTTTAGTGATGACCGTAAGTGATAGAGGGGAAAGGAAACAGACATTCTTTGTCTATTATTACTCAAAAACAACTGTGATAAAATCTTAGCAGGGCAGAGAATACTCAAGTGACCAGAAAATGCCTATACTGATTCTATAATATTAGCGGTAAACAATtcagaacaggagcagaggctTAGGGTTTAGCACCATTTGCTATTTGCTCAGTCAAAAGGATAAATGTGTGGCATTTTATtgcttgttttaaaatgtttaatgtagGGCCATTCTCACTAAATGCACACCAAAGTGGCAAGAAGTCAGACATGGTGTATAtcttacaatatatatatataacaatttCTAGACAAGTGAATGCAACTATGAACAGCACTTTTAAATCATATTCCAAAAGGGAAAATGCGTGAATAAATCGCATAAGCATGCATGCAACTGTGGTAAAAGAAGCAACAAAAGCCTCATTTAGCTCCTGTAATAGCTCCTATTGGGCTACTAAACAGAATTTGGAAATACTATGGTTTTAAATGCAGGATTGGGGGAGGGATAGTTAAAGAAAATATGAACGTATAATTGGTGCCCAAGTAAAAACAGTAATCACATAAAACTTGTCAAAACATGTGAAAGACCGACACCCCCTTTCATTGTGCTTACATCCAGATACAAAGTCATTAAACTGTTGGAACCCTGCAGAAGAAATAATTTGCTTTTTATATAGCTGGTTAGCTAATGCTGTGTTAATCCAACATTACATATAGCAACGGCTCCTTTACAGAAGTGCTGTTATGTGTTGTAATATACAACTGTGACAATAACGGCGTGTCATCATGGCAGTGTATTTGAGCTGCTGTCTGAAAtcacaaagaaaaagacaaacacagaacCTTACTAAggctttgtatttgtgtgtgtgtttatggatCATATAACATGTATTTCTCTTCTGTTTTGTGGCCTAGCAGTATGAATTTCAATGACACTGCCAACAGCTACCAAGCGGTATCATGATATAATCAGGCCTGCTGCTGCCCCCACTTcctgtattttttcttttttctttgtaaaCAGAGGGCCACAACTGAGTCATCACTGATGCGCACAACACCTTCACAGGCTGTGTCACAACTTACAGCTGTACATGTGCAAAGGGGACTTCTATGGGAGTGAATGAGTCAgtgacaggaaggaaagctaattaagccatcaTGGAAAACACTTTGAGGCGAAGCCAGTTGTTACAGTGACGGAATTCTCACTTGAAGTGCAGGTCCTTGAATGTGAAGTGCGTTTCCACAATGCCTGTGGTTTTGACTCGGGTCCTCAGGACATCCTGCTGAGTTGGGATGTAGGTGGCCTGGGATATCCTGTCCAAATCGTTCAAGTAGCTGAGAGAAGGACGCAAAGAAAAAGGACACGGGGAGGGAAACATCAgagggaaaagggagagagacagagagcaggaggGGAAACACGTGGGAGAAAATGTGTCAGAAGTAACAAGGTCAAGTACATAACTTCCAGAGGAACTAACAACTCCCAGTGCATCATCAGGGATAAACCAAGTCGGATTCCATATTTCAGAAGTTGTTTGAAACAGTATACTTCTTTGTGGAGCAACATGTTACAAGACACTGAGTTCAGCATGCATCAGATGTTAGGTAAAGATAAACCACAGTTAAGTTACAAGATAACATGCATCATTTGCCTGTGGTCAATTTAGACATGATGGCACGATTGCTTATTGCTTAAATGTGCTGTTGCCTTAGAGCAAGCCCCGAGCGCTGGTATTTTCTGTGGGGGAGTGCACACTGTTTTCTATTATAAAGTTAACGCTAATTAGCTAAAATGAGGTCAAAGTATAGGAGTATGACGTACAGTTACAGTCTTTTGAATATTTCATGCCATTAGTCAGAGACAGTCTGAACTGAATTCTTTATTTCTTCACAACAGAAACTTGAGCAATATCTGATCAAATATTTAGACCGTTTCACCAGCACTGCTAGTCAATGGATTTTGGCCATGTTTACGTCCGGTCAGCTGGTGTCATTTACGGCAGATTTGTGTCTGTTTTGatggacacacaaaaaaaaaaaaaatctttattttaaatatgcattttcttggttgcagtgtgtagctgtgtgcCAACTCAGGGGCTACAGCCTCAGCTCATGTGTATAGGTTCCTTGGGCTGCAACAGGAAATTAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307747 True 2983 lncRNA 0.41 2 9651247 9654254

Neighbor

gene id symbol gene type direction distance location
LOC120553346 ergic2 coding upstream 377339 9268198 ~ 9273908 (+)
guca1a LOC103358093,LOC102788764 coding upstream 531262 9116805 ~ 9119985 (+)
llph llph coding upstream 561699 9087173 ~ 9089548 (+)
fgf23 fgf23 coding upstream 631118 9017086 ~ 9020129 (+)
LOC120553653 fgf6,LOC100708453,LOC101478942,LOC103358103 coding upstream 641060 9006558 ~ 9010187 (+)
cd36 NA coding downstream 19737 9673991 ~ 9679815 (+)
chrm2a chrm2,LOC103140231,LOC106927335,LOC100534441,LOC102208075 coding downstream 298346 9952600 ~ 10029904 (+)
LOC120553071 NA coding downstream 446442 10100696 ~ 10103605 (+)
LOC120553783 LOC104962829,LOC102309285,LOC102208629,LOC100697441,LOC102795594,LOC101464871 coding downstream 450677 10104931 ~ 10107801 (+)
LOC120553300 NA coding downstream 454065 10108319 ~ 10116627 (+)
G226810 NA non-coding upstream 446796 9179139 ~ 9204451 (+)
G226755 NA non-coding upstream 611421 9037773 ~ 9039826 (+)
G226748 NA non-coding upstream 634972 9016073 ~ 9016275 (+)
G226747 NA non-coding upstream 635346 9015615 ~ 9015901 (+)
G226717 NA non-coding upstream 637601 9012843 ~ 9013646 (+)
G226918 NA non-coding downstream 97690 9751944 ~ 9754116 (+)
G226921 mtpn non-coding downstream 142219 9796473 ~ 9826525 (+)
G226922 NA non-coding downstream 151988 9806242 ~ 9806602 (+)
G226930 LOC104947167 non-coding downstream 213321 9867575 ~ 9868085 (+)
LOC120553125 NA non-coding downstream 279921 9934175 ~ 9936593 (+)
ndufb2 ndufb2,LOC102790702 other upstream 409898 9237226 ~ 9241349 (+)
lhfpl3 lhfpl3,LOC101483460 other upstream 478027 9134594 ~ 9173220 (+)
rps16 rps16,LOC103382554 other upstream 1218550 8426635 ~ 8432697 (+)
LOC120553156 LOC104945813 other upstream 2081944 7566655 ~ 7569303 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 2119170 7525892 ~ 7532077 (+)
G227121 kera other downstream 1043000 10697254 ~ 10699718 (+)
G227141 dcn,LOC103382665 other downstream 1077815 10732069 ~ 10737503 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other downstream 1294031 10948285 ~ 10986201 (+)
G227216 NA other downstream 1448582 11102836 ~ 11112905 (+)
G227278 LOC104928793 other downstream 2034915 11689169 ~ 11757317 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G276421 NA unknown NC_047612.1 CM018558.1 4082278 ~ 4091863 (-)