G226918


Basic Information

Item Value
gene id G226918
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 9751944 ~ 9754116 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU307781
cacacacacacacacacacacacacacacacacacacacagtagctatAAAGGTAAGAATAAAGATGAAAtccattttatgttttattgcttattatttaataattttagGACTACATTTTTGAGCAAAATGGCATTCAGCTCTATGGTTTCTGTTGATGTCTGATTGGGTGATCACAAAATACACAAGTTGTGTGTTAGGATAGGAAGGAAGATATTTTTTGTAACAGATCCTAATTGCAGAGCTTGGGAGAGGAGACAAAGTCCTTTATTTGCAATGTACTTATTCAcaagctacccagcagtatgtaaagtaattaaaataagccccacctttaccagctacaacattaaagtgatgtacaTGTTAATGCATCTTTAATTATAATCCTTCCTGTCCTTCCTGCCAGCTGCCATCTCCCTGCAGCCAGTCCCCCTAGCTCTGTGTCAGGACGGAGAGGTCGGGAGGTGAAGCCCACACTACAACTTTACAGCATACTTTGCATTTAATTTTGCACAACTTGCACTATCCCAACCTCACACATGTATATACAGCATCCAGTAAAAAAATCGTCCACTCTTCAAGTTATTGTTTATCagtattgtatgttgttgtATATTGCTTttaagtatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctaattatATAATATGCATTATTCAAATGGGCCATTCTGAATATACTGTTGGTacattaagtatattttgataatactatatgataatataatgtatataaagctttaaagtgcccatattatgctcattttcaggttcataattgtattttgaggttgtaccggaataggtttacatggtttaattttcaatatttttgttgtattgcacattgctgcagatcctcttttcaccctgtgtgttcaggtctctgttttagctacagagtgagacatctcacttctgtaccatctttgtttgcagttgcacatgcgcagtagctaggtaaggatcacatcagctagttAGCTGTTTCTTTaacttcggcctgtacaaggcaggattagccgagatacttcttctaaacgagggcacgcttccaactttgtgtggaatacctacagaacagggacatgaaagtagttattttgtagattagggtgaacttctgtgtgtgtgtgtgtgttgtagcagtgttttgccattgagaacgaggtagcacgCTAGCGCTTGCGGTCAGCCACCTCGTCTCGGCTGCTGatgtagaaagccctgcagattttgaacagctcacccggagactgaaggcaggacacattcagaaacccctATCtaactcaaaacagcatggatgttttttttttttccaagtttgtatgcgtgtggaagcaccagagacacaaaacaacatccaaaatcccagaaaatgtgtttttttcataatatgggcactttaagaacaTGAAGTTTCAGACAAGGAAATGCAGTTCTGTCTGCAGCCACTTGGTGCTGCTCTGTCAACATGCATAATGCTGCTGTGGGTTATGCATGACATTTAGGGATAATACACTAAATGGATAAAATATTAGACTCATTGTTTCATGAAGTATACTGATAAGTCAATAACCCGGGTAAAAGCCTCATTTTTCTTATTAAATCTACAGCCACAATCacagaggaggagctggagaTAAAAAGAAGCAATGCAGTtagtaagtcattttttaaactttgagaCAATTAAGGGGTACTTTATGTCAGAAGCAATGCAATTCCAAACTATGAAGTTCTGGGGATTGCCATATAACACATGGAGCAAAGATGCTGTAAGTGTTAGAATGCCTTAATGAAACTGTCAAGAGTCAATACTGGGAACAAGAGCCTGAGCTCTACCGCTTTCTTCAATACGCCGGCTTCTTTACGCTCCGTCAAGTAGTGCCCAGACACATCCCAAAACTCATCATCCACATTAGAGCGGTGCAGGGAGTGTCTTAGAAGGAAATTCCACACAGTCTTCACTTACTCATCAATCAGTCCTCCCGAGTCAGCGCCAGAAGCTTGGGCATTGGATGAATGCTGACATGCTGAGAAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307781 True 2118 lncRNA 0.39 2 9751944 9754116

Neighbor

gene id symbol gene type direction distance location
cd36 NA coding upstream 72129 9673991 ~ 9679815 (+)
LOC120553346 ergic2 coding upstream 478036 9268198 ~ 9273908 (+)
guca1a LOC103358093,LOC102788764 coding upstream 631959 9116805 ~ 9119985 (+)
llph llph coding upstream 662396 9087173 ~ 9089548 (+)
fgf23 fgf23 coding upstream 731815 9017086 ~ 9020129 (+)
chrm2a chrm2,LOC103140231,LOC106927335,LOC100534441,LOC102208075 coding downstream 198484 9952600 ~ 10029904 (+)
LOC120553071 NA coding downstream 346580 10100696 ~ 10103605 (+)
LOC120553783 LOC104962829,LOC102309285,LOC102208629,LOC100697441,LOC102795594,LOC101464871 coding downstream 350815 10104931 ~ 10107801 (+)
LOC120553300 NA coding downstream 354203 10108319 ~ 10116627 (+)
foxm1 foxm1 coding downstream 386666 10140782 ~ 10147571 (+)
G226885 NA non-coding upstream 97690 9651247 ~ 9654254 (+)
G226810 NA non-coding upstream 547493 9179139 ~ 9204451 (+)
G226755 NA non-coding upstream 712118 9037773 ~ 9039826 (+)
G226748 NA non-coding upstream 735669 9016073 ~ 9016275 (+)
G226747 NA non-coding upstream 736043 9015615 ~ 9015901 (+)
G226921 mtpn non-coding downstream 42357 9796473 ~ 9826525 (+)
G226922 NA non-coding downstream 52126 9806242 ~ 9806602 (+)
G226930 LOC104947167 non-coding downstream 113459 9867575 ~ 9868085 (+)
LOC120553125 NA non-coding downstream 180059 9934175 ~ 9936593 (+)
G227088 NA non-coding downstream 784080 10538196 ~ 10538689 (+)
ndufb2 ndufb2,LOC102790702 other upstream 510595 9237226 ~ 9241349 (+)
lhfpl3 lhfpl3,LOC101483460 other upstream 578724 9134594 ~ 9173220 (+)
rps16 rps16,LOC103382554 other upstream 1319247 8426635 ~ 8432697 (+)
LOC120553156 LOC104945813 other upstream 2182641 7566655 ~ 7569303 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 2219867 7525892 ~ 7532077 (+)
G227121 kera other downstream 943138 10697254 ~ 10699718 (+)
G227141 dcn,LOC103382665 other downstream 977953 10732069 ~ 10737503 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other downstream 1194169 10948285 ~ 10986201 (+)
G227216 NA other downstream 1348720 11102836 ~ 11112905 (+)
G227278 LOC104928793 other downstream 1935053 11689169 ~ 11757317 (+)

Expression


Co-expression Network