G227020


Basic Information

Item Value
gene id G227020
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10220956 ~ 10284085 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU307912
ccttttattttcatcagtAATTCAGCAGCTTTGACAGACAAAATACAACTTATTACtttgtgtctttttctttcctccacAGGGTCTCAGAGGGGGGAGTTTCCCAAAGAGAAGGGAGGAGGGGCGGTGATAAATGGAGGAAAAACACAAGATGATAAAGAAAGAAGTTCCTCTTCACCAAACAAAACTCTTCACATACAATCGTGTTAAAATTCTACTTATGACATTTCAAGTCTTGATACTTGACATGTTTGTGCAAAGAACTAGTTGCGTTTCACCCCTTTTACAGGAAGCAGAactggtttgttttttaaagatagaAACTGATATGAACTGGGCCGAGCTAAAGTACAGCTTAAGACGGTTGCATATTTAGACTGATGGATGTACTGAATCCACGGTTAACCGTTACATGTGAGAGCAAAGTTTGGAGACCTCAAACTGTCCTTTTATAGTCGTTTGTGCTGTGCCAAAGCATGTGCTGTTAGAAGTAGGTcgatttttgtcattttaaacatCTACTCAGGGGTTTCCCCTGAAATCTTCACACAGGCATGATGCATGGAACAGCAGCAGATATGGTCAATGCTTATCCATGACAAAATTACACATGGTAGATTAGAAatttacataaacacacatacatatatatacacacacatatatata
>TU307913
ccttttattttcatcagtAATTCAGCAGCTTTGACAGACAAAATACAACTTATTACtttgtgtctttttctttcctccacAGGGTCTCAGAGGGGGGAGTTTCCCAAAGAGAAGGGAGGAGGGGCGGTGATAAATGGAGGAAAAACACAAGATGATAAAGAAAGAAGTTCCTCTTCACCAAACAAAACTCTTCACATACAATCGTGTTAAAATTCTACTTATGACATTTCAAGTCTTGATACTTGACATGTTTGTGCAAAGAACTAGTTGCGTTTCACCCCTTTTACAGGAAGCAGAactggtttgttttttaaagatagaAACTGATATGAACTGGGCCGAGCTAAAGTACAGCTTAAGACGGTTGCATATTTAGACTGATGGATGTACTGAATCCACGGTTAACCGTTACATGTGAGAGCAAAGTTTGGAGACCTCAAACTGTCCTTTTATAGTCGTTTGTGCTGTGCCAAAGCATGTGCTGTTAGAAGTAGGTcgatttttgtcattttaaacatCTACTCAGGGGTTTCCCCTGAAATCTTCACACAGGCATGATGCATGGAACAGCAGCAGATATGGTCAATGCTTATCCATGACAAAATTACACATGGTAGATTAGAAatttacataaacacacatacatatatacacatatatatatatatatatatatatatatgtatgtagtcAGGCAGCTTCAATGTGCCTTAATTTTCCTAATCCCACAAGTTACTACATTTCTCTCTCAACTCGTCAGCTCTCTCACAGCTCTGCTTGTTGTATTTACAGTGACTCAGTTTTAAAAGTGCTGCACATGTTAAGTAGCTATTTACACATAGAAAAATAGGAGGGGGGATACAGACATTATTGTTGGGCATTTTGCTAACAAAGCTGTGGAACTGACTGATATAAATTCATCCTCTGCTTGTAATGAAATGCTTGTtgcggcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacctcgcaTGGGTCAAAGCAAAGGTCAAGAGGCAGAAAAGGAAGTAAATGAGATAAGAAATGACAAGAATAGGAAATGCTGACAAACAGTAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307912 False 669 lncRNA 0.38 2 10220956 10284085
TU307913 True 1116 lncRNA 0.39 2 10274332 10284085

Neighbor

gene id symbol gene type direction distance location
trnay-gua_61 NA coding downstream 24523 10196347 ~ 10196433 (-)
trnay-gua_60 NA coding downstream 25086 10195784 ~ 10195870 (-)
bik NA coding downstream 33983 10183285 ~ 10186973 (-)
si:ch73-352p4.8 LOC105937590,LOC104962836,LOC107085821,LOC102237094,LOC103140239,LOC107386545,LOC103459124 coding downstream 67802 10147639 ~ 10153154 (-)
rhno1 NA coding downstream 80250 10138942 ~ 10140706 (-)
apaf1 apaf1 coding upstream 280345 10564430 ~ 10623168 (-)
tcp11l2 tcp11l2,LOC102777109 coding upstream 339935 10624020 ~ 10632377 (-)
LOC120553733 NA coding upstream 350663 10634748 ~ 10635920 (-)
si:ch211-244b2.3 NA coding upstream 376835 10660920 ~ 10665486 (-)
si:ch211-244b2.4 NA coding upstream 382417 10666502 ~ 10671184 (-)
G227019 NA non-coding downstream 506 10218086 ~ 10220450 (-)
G226917 NA non-coding downstream 478396 9742004 ~ 9742560 (-)
G226803 LOC103358093,LOC102788764 non-coding downstream 1100985 9116810 ~ 9119971 (-)
G226800 NA non-coding downstream 1181099 9037771 ~ 9039857 (-)
G226797 NA non-coding downstream 1191586 9029046 ~ 9029370 (-)
LOC120553506 NA non-coding upstream 225646 10509731 ~ 10537837 (-)
G227089 NA non-coding upstream 254119 10538204 ~ 10538416 (-)
G227127 NA non-coding upstream 318509 10602594 ~ 10658927 (-)
LOC120553135 NA non-coding upstream 355662 10639747 ~ 10660499 (-)
LOC120553801 NA non-coding upstream 656293 10940378 ~ 10942825 (-)
dram1 dram1 other downstream 1406516 8809393 ~ 8814440 (-)
ppfia2 ppfia2 other downstream 1427046 8565242 ~ 8793910 (-)
G226495 LOC103356655,LOC105934024 other downstream 2329645 7888571 ~ 7891311 (-)
LOC120553151 LOC107386793,LOC104950937 other downstream 2726649 7422165 ~ 7494307 (-)
usp44 usp44,LOC102783730 other downstream 2942632 7269037 ~ 7278324 (-)
G227082 anks1b other upstream 229409 10513494 ~ 10522962 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other upstream 696113 10980198 ~ 10981259 (-)
hgfa LOC103365344,LOC104958230 other upstream 1174496 11458581 ~ 11482578 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other upstream 1333270 11617355 ~ 11676832 (-)
cracr2ab LOC102301749,LOC103365394 other upstream 1553163 11837248 ~ 11848941 (-)

Expression


Co-expression Network