G227082 (anks1b)


Basic Information

Item Value
gene id G227082
gene name anks1b
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10513494 ~ 10522962 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU308019
TAACTTTTGGACATTTTAATTGATAATTTGATTCCATACACAAAGTAAATTGCTGAGATGTGGAAACACAGCAACCTTGCTACGAAGAAGTGGGATGGGGCAAGAAACAAACAATCAGAgatgtttaaaacaaaccttCAGGTTGACAGTGAATGGTTTTAAACATCCATCACAGTTTCAGACTTCCTGGTCGAACCTTGATCTAATGTAGTTGCACCCAGATTAAGGGAGTATAATACAAACATATGATAcacaatactttattaatcccccaGGGGGTAACTGAGTGGCACCATACATATAGGACAGACAACAGGTGAGACAATGGGAGAACACATACACATCTCAAGGCAATACAAAAAGGGGAGAGCACAGCATTTTAATAAATGGTGTAAACATTAATGTGACTATAGTAATATGACAACATATTCATGGACACCAACATTACCACAATCCTCAGAACAACCACCATGCTAGTCATCAAAATCAGATCATCAACAAGCAAGTACATTTCAGATGCACTGTTTTAGATAATGTAGCTAAGCTTTTGGCTGTCTGATTGTGTTTTCTTGCCCAGCTTCAGTAGCTGTTGTTCCCAGATTTCTGCAATTACTTTGGCAGTACAATTTTAACACCAATAACATGTTGAAGTAATCAACTGTAATTATCCTTTCAAACTGTAGTGAATGAAAAAAACGCAAATAACTGATGACAACTTTATCCAATAATGGTTTTAACAATTCATGTTTTATTCCATGTGCTTTACAAGGATATAAATAATGGCCAAAATTACAAAAATCTGTGTGCTGGAAGCCCAAGCCTATGTACATAAGTTGGTCAGCAGAGATGTAACCAAATAACCCATTTCAGTTTTCATTCAAAATACAATCTATACAATCTACCGGTTTCTTTTAATTTCCAACTTTTATTTTGGTACCTTCTTTCCAGTGCCACATACTTTACTTCAaatcctttttctcttttacattacatgtatgAACAATGAGTTGGCAAAATATCTATGTACATTTTATAATTGGATAACGTCTCATCCAAATAATACAGTAATACTGCGTTTAAAATAGTACATCTGCTAGATAAGAGTAGAGCCCCATGAGAAATGATGGAGGGTTGACCTGACAAGAGTTAGCTAGCCACCTGCAACATTCACTCTCTTTGTACAAGTATGATCATATAGTTTTGATTTTTTAAAGGATGGCCATCATTTTCAAGCCTAATGTTTTCATCTCATATCATAGAAAAATAATGTAACATTAAGACAACAGTAGACAAGAATTGCACAAGAATAATCATAATCATCATGGTAATATAATACTctcatattaaacattaaaatgtcgGGCAATACGAATAgaatacttatttttttatttttttttaacgccAGATGCTGTTTTGTTCACATACTGTAGGTTCATCCGTTATGAGACATCTCACCAGGACACACATGTTGCATCTCCAGCGTGTTGCAGCTAGTCCAATCACATTTACACGCTTGTGCATATATCTCGGTATTATTTTCTGAgttcaaagaagaagaaaaagaaagagccAGCCAAACGTCCTTAAACCCGTGCCAAAACTGACACATGCCCAGTGGTGTCTTTAGCGAGTCCATTGTCTGTTACCAACAGATGCCCTGTAACCATACTCAGTCTCCATGGAGAAACGGTGACCATCCAAAAGTTCACAGGTCACACGTCCCAGTTGGGCGCATTACACAGCTCCTGCTGTAGTTGCAGAAACTTGAGGCTGCTTTCAAATAAGTGTACATTCAGAGCAGACAGTCATCTGTCAAGATGCAGTCCTGttagtgtgtatgtttgtcatGTTTACTGTGTCAAGTATCATATGGATGAATGATGTTAAAATTTGGTAGTCAACCTTAAACACTGTGGAGTAGCATCCATGTTTGTAGTCCTTTTGTAGTCCAttttgcattgtgtgtgtgacaagGTCCGTGTTTAGGGCTGGCTACATTCTTTGCATTCCACAGTAATAGACATGAGCGTCCGGCATTGCCCTGCAAATGAGATGACATCACTTATCGAGAGAGCCCTCACACCCCGCCTCTCCACCGGCCCCCTGCTCAGCAAATCCAAAATGGCCACCATGCGTCTCATAAGCCACATGCGAAACCTTTTACATACAAGATTTTTTCCCCGCGAAATAAAATAAGGTTTATGGCCAGGGaaatttggtcaaaaataattctgaacacatacacacacacatgtgctgAAAAGGATGctagaaaaagcaacaacaaaaaaaccctACTACTTCCTGTTTCACAGGACAAGATTAAAGTCGTTTGTCAAAGAAATTCACAAGTTTAttactttcaaaaaaataatcttatatAAAGAATCAAAAAGTTGAAATACATTCTAGTAGCCTGCTGGATGAACCAGTTTGAGTCAAAGTTAGACTGTGCTACATCACCTCTCCTGTAATTCAGCTCTCCtttttgattaaaaaatgtctaaaaagtcTGAACTTTCCTCCAGTTGTCGTGTTTCGACAACGGCCCTCCTCATTGTCAGCTCCCACACTGGGCTTAACAGACAGCTAAAACACTGTCGCAGCTTTTAGCAGTATTGTGGTTACAAATCTCATTCAAGTTGTCAGGGGGCAGTTGGACAAAGGGGCTGAAATGTTAAGAGAAGCGAGGGATGGAGGCAGTCAGAGGAGAAAAAATAGGAGAGACGAAGCCAAACGGTTGCACCCAtcaacaggaagaaaaaaaacaagaagcaGAACAACCAAAGGGTTGACTGCTGAACgacaaacaggaagtggaaaAATGGAGCTGACCATTCCCCCTACAGGTGGAGACAGAGAAGTGCACCACAGCCCTGGTTTCAAAGGTCATGCGCCAGCCCTGCAGGCAGGAGGATGGGGCCCGGGCCAAAGAGGGGGAGAGCAGaaacaaagagaagaagagacaaGGAGAACGAAGAGAGACAGCGCAGCGCCAAACGTCATCATGCAGTGGACAGGCTCGTCTAACGGGGGGGGGCgggatgttttgttttttttatttttcagccgGTGAGGTGACGCGGCGGCGTGCGTCGCTCTTGCCCATCTCCGGGGCGGGGCCCCAGTACAGGGCAACCTCtgaaaggcacacacacacaggagtggACAAGGCGGGTGTATGTTAGAAAATAGTGGTCTCATACTTGGTGTTGACTCCTCTCTTGGCCTCCTGACCCGGCTCCACAATCCATGGCACGTTGGCGTGGCCCTTCTGGTCCATGGACGGCTGCTCCATAGATTTGCGGATGTTGACTCGAGGTTTGGGGACAGGTTTGCTGGGCTTGCTGTCAAAGCTCTCAGGCAGTGTGGATGATCCGTGGCCGCTCTTTCTGGCCTGCAGGGCCAGCTGGTAGGCCACCTCGAAGGCCTGGCCGAGTGTCAGAATGATCTCATACGCCAGGTTC

Function

symbol description
anks1b Predicted to act upstream of or within regulation of synaptic plasticity by receptor localization to synapse. Predicted to be located in cytoplasm. Orthologous to human ANKS1B (ankyrin repeat and sterile alpha motif domain containing 1B).

NR:

description
PREDICTED: ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308019 True 3470 TUCP 0.42 2 10513494 10522962

Neighbor

gene id symbol gene type direction distance location
LOC120553502 NA coding downstream 248789 10263985 ~ 10264705 (-)
ckap4 NA coding downstream 266229 10242672 ~ 10247265 (-)
trnay-gua_61 NA coding downstream 317061 10196347 ~ 10196433 (-)
trnay-gua_60 NA coding downstream 317624 10195784 ~ 10195870 (-)
bik NA coding downstream 326521 10183285 ~ 10186973 (-)
apaf1 apaf1 coding upstream 41468 10564430 ~ 10623168 (-)
tcp11l2 tcp11l2,LOC102777109 coding upstream 101058 10624020 ~ 10632377 (-)
LOC120553733 NA coding upstream 111786 10634748 ~ 10635920 (-)
si:ch211-244b2.3 NA coding upstream 137958 10660920 ~ 10665486 (-)
si:ch211-244b2.4 NA coding upstream 143540 10666502 ~ 10671184 (-)
G227020 NA non-coding downstream 229409 10220956 ~ 10284085 (-)
G227021 pacsin2,LOC102778832 non-coding downstream 287597 10223494 ~ 10225897 (-)
G227019 NA non-coding downstream 293044 10218086 ~ 10220450 (-)
G226917 NA non-coding downstream 770934 9742004 ~ 9742560 (-)
G226803 LOC103358093,LOC102788764 non-coding downstream 1393523 9116810 ~ 9119971 (-)
G227089 NA non-coding upstream 15242 10538204 ~ 10538416 (-)
G227127 NA non-coding upstream 79632 10602594 ~ 10658927 (-)
LOC120553135 NA non-coding upstream 116785 10639747 ~ 10660499 (-)
LOC120553801 NA non-coding upstream 417416 10940378 ~ 10942825 (-)
G227190 LOC104968094 non-coding upstream 425696 10948658 ~ 10949164 (-)
dram1 dram1 other downstream 1699054 8809393 ~ 8814440 (-)
ppfia2 ppfia2 other downstream 1719584 8565242 ~ 8793910 (-)
G226495 LOC103356655,LOC105934024 other downstream 2622183 7888571 ~ 7891311 (-)
LOC120553151 LOC107386793,LOC104950937 other downstream 3019187 7422165 ~ 7494307 (-)
usp44 usp44,LOC102783730 other downstream 3235170 7269037 ~ 7278324 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other upstream 457236 10980198 ~ 10981259 (-)
hgfa LOC103365344,LOC104958230 other upstream 935619 11458581 ~ 11482578 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other upstream 1094393 11617355 ~ 11676832 (-)
cracr2ab LOC102301749,LOC103365394 other upstream 1314286 11837248 ~ 11848941 (-)
G227429 LOC104958361,LOC103370548 other upstream 1761964 12284926 ~ 12288154 (-)

Expression


Co-expression Network