G227089


Basic Information

Item Value
gene id G227089
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10538204 ~ 10538416 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU308027
cctacgtcagtgtagccgctcaacagttaccgcacatttttgaaagctggatgagttttcgCTGGCTTACTCGCTTCAGTTCGTCATGGATATCcgtaagtggttgaaaagcccaccaacattctcctctgccaaattggatacgacaccgacgcctcctgatgttgtcgttggagaaggagcccctggacgacagtctgagcctgatgctag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308027 True 213 lncRNA 0.51 1 10538204 10538416

Neighbor

gene id symbol gene type direction distance location
LOC120553502 NA coding downstream 273499 10263985 ~ 10264705 (-)
ckap4 NA coding downstream 290939 10242672 ~ 10247265 (-)
trnay-gua_61 NA coding downstream 341771 10196347 ~ 10196433 (-)
trnay-gua_60 NA coding downstream 342334 10195784 ~ 10195870 (-)
bik NA coding downstream 351231 10183285 ~ 10186973 (-)
apaf1 apaf1 coding upstream 26014 10564430 ~ 10623168 (-)
tcp11l2 tcp11l2,LOC102777109 coding upstream 85604 10624020 ~ 10632377 (-)
LOC120553733 NA coding upstream 96332 10634748 ~ 10635920 (-)
si:ch211-244b2.3 NA coding upstream 122504 10660920 ~ 10665486 (-)
si:ch211-244b2.4 NA coding upstream 128086 10666502 ~ 10671184 (-)
LOC120553506 NA non-coding downstream 367 10509731 ~ 10537837 (-)
G227020 NA non-coding downstream 254119 10220956 ~ 10284085 (-)
G227021 pacsin2,LOC102778832 non-coding downstream 312307 10223494 ~ 10225897 (-)
G227019 NA non-coding downstream 317754 10218086 ~ 10220450 (-)
G226917 NA non-coding downstream 795644 9742004 ~ 9742560 (-)
G227127 NA non-coding upstream 64178 10602594 ~ 10658927 (-)
LOC120553135 NA non-coding upstream 101331 10639747 ~ 10660499 (-)
LOC120553801 NA non-coding upstream 401962 10940378 ~ 10942825 (-)
G227190 LOC104968094 non-coding upstream 410242 10948658 ~ 10949164 (-)
LOC120553014 samd3,LOC101476819 non-coding upstream 421944 10960360 ~ 10975333 (-)
G227082 anks1b other downstream 15242 10513494 ~ 10522962 (-)
dram1 dram1 other downstream 1723764 8809393 ~ 8814440 (-)
ppfia2 ppfia2 other downstream 1744294 8565242 ~ 8793910 (-)
G226495 LOC103356655,LOC105934024 other downstream 2646893 7888571 ~ 7891311 (-)
LOC120553151 LOC107386793,LOC104950937 other downstream 3043897 7422165 ~ 7494307 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other upstream 441782 10980198 ~ 10981259 (-)
hgfa LOC103365344,LOC104958230 other upstream 920165 11458581 ~ 11482578 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other upstream 1078939 11617355 ~ 11676832 (-)
cracr2ab LOC102301749,LOC103365394 other upstream 1298832 11837248 ~ 11848941 (-)
G227429 LOC104958361,LOC103370548 other upstream 1746510 12284926 ~ 12288154 (-)

Expression


Co-expression Network