G227116


Basic Information

Item Value
gene id G227116
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10665709 ~ 10667280 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU308058
ACAACAAACggacaacaaaaacagaaaaatctgAATCGGAAACAGATGTGGCTACTTTATCGATACCCCGGGGGAAATTGTGTTATGTTACAGTTTCTCCCGTTCTATTGAAATAAAGATAGCCTAAAaaaagtattacatttttttatttaggcctATGTAAAAACATGCATACGAGAACACCATGTTGACTATTACAAAAGTGTAAACAATTATAATGCTGGGTTTGGGATCCATGATTGAGTATGGTTAAAACGCAAGGATAGTATAaattggaatatttaaaatgtagaaaTGCATTATTAATGCATGAGTATTGCACAGTttaaatattgcacagtatAATTGTCCTGTTAAGTCAGTGTGACCCACATTAATattatttctgtctcttttatAAAGTTGCATGTTATCTTTTGGCCTTTTTTTGGTGGAGATATTATAACATTAATCTCAGTTTAATTGCAGTCAGGCAACACACAAGTTATATAATGATGCATGTAGCCTAAGGCAAATTTCTTAAAGAACTATCATTTTTGTAATATATTTGACTATAATTATAACAGTGGCATTTTGAATCTGCTTTGTGTTCTGTCTATACATTATCATTGTCTCAGTTAAGTGAGAACTTTATTTACACAGATTGTTTTACAGTATATCAGGGCTGTGGAAATTCTATAGGCATAAAACATTATATGAATTGAACTGAAAAATGGCTGATTTCTATTGCATAATGTAACCACCTGAGTCATGTTAAACACTTCAACGCTAAAGCACATTAACAGCTGTTTAGAAATGGCCTTGAATTTGCATTAGATCTGGCTCTAATCTACTATATTAGGGTATATCAGAAGAGGCAGGTGTGTAGATATGTGGCAGCATAAATGGGACATGAAATATCTGATAATTCCAAGAGTGTCTGTCTATAGCATCATCCGGTATGGCAGTATGCAAGTTGGTACAGTACATCATCTCAGGCAGCATTTAGGTGTTGGTAAACTTCAAAGCCTTTTGACACAATCTCCTTTGGcaaccaaatttaaaaaaaaacagacagcctTGAGCATAATTTCATCATATTCCAAATTCCTTTCTAATGTAAACAGCATTAAATGTATTGCATATAGGTCAATACAGAGCCAAACACCCCAAAAATATGAATCTCAGATTACAATGATTGTATAAATATGGTATTGCACAATTGTTTGTAGACTTTCTTCTTAGGGTCTTTGAAATCCCCTTTAATGCTCACACCAGCACATGTCTGACCTTGCGTGAACGCATGGTCTTGAGGTTGGTTTGGATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308058 True 1307 lncRNA 0.34 2 10665709 10667280

Neighbor

gene id symbol gene type direction distance location
scyl2 NA coding upstream 6698 10648321 ~ 10659011 (+)
depdc4 depdc4 coding upstream 21938 10638588 ~ 10643771 (+)
anks1b anks1b coding upstream 143472 10288477 ~ 10522237 (+)
uhrf1bp1l NA coding upstream 381609 10249758 ~ 10284100 (+)
LOC120553694 ikbip coding upstream 424204 10235016 ~ 10241505 (+)
si:dkeyp-38g8.5 NA coding downstream 4768 10672048 ~ 10674051 (+)
LOC120553009 NA coding downstream 351946 11019226 ~ 11023758 (+)
lrrc4.1 LOC104918788,LOC103365345,LOC100694050 coding downstream 695483 11362763 ~ 11367955 (+)
pax4 NA coding downstream 786180 11453460 ~ 11456592 (+)
LOC120553760 NA coding downstream 1144747 11812027 ~ 11822653 (+)
G227108 NA non-coding upstream 35497 10628808 ~ 10630212 (+)
G227107 tcp11l2,LOC102777109 non-coding upstream 37727 10625446 ~ 10627982 (+)
G227088 NA non-coding upstream 127020 10538196 ~ 10538689 (+)
LOC120553125 NA non-coding upstream 729116 9934175 ~ 9936593 (+)
G226930 LOC104947167 non-coding upstream 797624 9867575 ~ 9868085 (+)
G227139 NA non-coding downstream 38630 10705910 ~ 10709545 (+)
LOC120553079 NA non-coding downstream 93973 10761253 ~ 10770671 (+)
G227152 btg1 non-coding downstream 175276 10842556 ~ 10851951 (+)
G227155 NA non-coding downstream 204767 10872047 ~ 10872679 (+)
LOC120553495 NA non-coding downstream 247655 10914935 ~ 10927854 (+)
ndufb2 ndufb2,LOC102790702 other upstream 1424360 9237226 ~ 9241349 (+)
lhfpl3 lhfpl3,LOC101483460 other upstream 1492489 9134594 ~ 9173220 (+)
rps16 rps16,LOC103382554 other upstream 2233012 8426635 ~ 8432697 (+)
LOC120553156 LOC104945813 other upstream 3096406 7566655 ~ 7569303 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 3133632 7525892 ~ 7532077 (+)
G227121 kera other downstream 29974 10697254 ~ 10699718 (+)
G227141 dcn,LOC103382665 other downstream 64789 10732069 ~ 10737503 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other downstream 281005 10948285 ~ 10986201 (+)
G227216 NA other downstream 435556 11102836 ~ 11112905 (+)
G227278 LOC104928793 other downstream 1021889 11689169 ~ 11757317 (+)

Expression


Co-expression Network