Gene
RNA
| Item | Value |
|---|---|
| gene id | G227121 |
| gene name | kera |
| gene type | unknown |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 10697254 ~ 10699718 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| kera | Predicted to act upstream of or within visual perception. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in central nervous system; corneal epithelial cell; epidermis; and eye. Human ortholog(s) of this gene implicated in arcus senilis; cornea plana; and corneal dystrophy. Orthologous to human KERA (keratocan). |
| description |
|---|
| PREDICTED: keratocan |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU308063 | True | 1079 | TUCP | 0.50 | 3 | 10697254 | 10699718 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkeyp-38g8.5 | NA | coding | upstream | 23203 | 10672048 ~ 10674051 (+) |
| scyl2 | NA | coding | upstream | 38243 | 10648321 ~ 10659011 (+) |
| depdc4 | depdc4 | coding | upstream | 53483 | 10638588 ~ 10643771 (+) |
| anks1b | anks1b | coding | upstream | 175017 | 10288477 ~ 10522237 (+) |
| uhrf1bp1l | NA | coding | upstream | 413154 | 10249758 ~ 10284100 (+) |
| LOC120553009 | NA | coding | downstream | 319508 | 11019226 ~ 11023758 (+) |
| lrrc4.1 | LOC104918788,LOC103365345,LOC100694050 | coding | downstream | 663045 | 11362763 ~ 11367955 (+) |
| pax4 | NA | coding | downstream | 753742 | 11453460 ~ 11456592 (+) |
| LOC120553760 | NA | coding | downstream | 1112309 | 11812027 ~ 11822653 (+) |
| LOC120553761 | NA | coding | downstream | 1115395 | 11815113 ~ 11822653 (+) |
| G227116 | NA | non-coding | upstream | 29974 | 10665709 ~ 10667280 (+) |
| G227108 | NA | non-coding | upstream | 67042 | 10628808 ~ 10630212 (+) |
| G227107 | tcp11l2,LOC102777109 | non-coding | upstream | 69272 | 10625446 ~ 10627982 (+) |
| G227088 | NA | non-coding | upstream | 158565 | 10538196 ~ 10538689 (+) |
| LOC120553125 | NA | non-coding | upstream | 760661 | 9934175 ~ 9936593 (+) |
| G227139 | NA | non-coding | downstream | 6192 | 10705910 ~ 10709545 (+) |
| LOC120553079 | NA | non-coding | downstream | 61535 | 10761253 ~ 10770671 (+) |
| G227152 | btg1 | non-coding | downstream | 142838 | 10842556 ~ 10851951 (+) |
| G227155 | NA | non-coding | downstream | 172329 | 10872047 ~ 10872679 (+) |
| LOC120553495 | NA | non-coding | downstream | 215217 | 10914935 ~ 10927854 (+) |
| ndufb2 | ndufb2,LOC102790702 | other | upstream | 1455905 | 9237226 ~ 9241349 (+) |
| lhfpl3 | lhfpl3,LOC101483460 | other | upstream | 1524034 | 9134594 ~ 9173220 (+) |
| rps16 | rps16,LOC103382554 | other | upstream | 2264557 | 8426635 ~ 8432697 (+) |
| LOC120553156 | LOC104945813 | other | upstream | 3127951 | 7566655 ~ 7569303 (+) |
| LOC120553154 | LOC104945813,LOC103356648 | other | upstream | 3165177 | 7525892 ~ 7532077 (+) |
| G227141 | dcn,LOC103382665 | other | downstream | 32351 | 10732069 ~ 10737503 (+) |
| impdh1b | LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 | other | downstream | 248567 | 10948285 ~ 10986201 (+) |
| G227216 | NA | other | downstream | 403118 | 11102836 ~ 11112905 (+) |
| G227278 | LOC104928793 | other | downstream | 989451 | 11689169 ~ 11757317 (+) |
| st8sia1 | st8sia1 | other | downstream | 1407234 | 12106952 ~ 12126545 (+) |
