G227217


Basic Information

Item Value
gene id G227217
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 11043412 ~ 11054195 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU308212
tttattttcagtccGTCACCGGCCTGTGTCTACATGGGGTTATTACTATACCACCAGGGGGAAGTGCGATTCATTTTTATTAAGgtgATGACTTCTAACTGCAGCCCTAAAATAGACATGGAACCTGGATTACCCATTGAAGGCACTCTGCAGAACGTTGATGGACGACCTGGTCTGGCAACATAATTGGAAATGCCAGAGAAAAAACGCACAGGTGTTTTAGAGCGATGAAGGAGACTCGTGTACAAAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308212 True 252 lncRNA 0.44 3 11043412 11054195

Neighbor

gene id symbol gene type direction distance location
LOC120553009 NA coding upstream 19654 11019226 ~ 11023758 (+)
si:dkeyp-38g8.5 NA coding upstream 369361 10672048 ~ 10674051 (+)
scyl2 NA coding upstream 384401 10648321 ~ 10659011 (+)
depdc4 depdc4 coding upstream 399641 10638588 ~ 10643771 (+)
anks1b anks1b coding upstream 521175 10288477 ~ 10522237 (+)
lrrc4.1 LOC104918788,LOC103365345,LOC100694050 coding downstream 308568 11362763 ~ 11367955 (+)
pax4 NA coding downstream 399265 11453460 ~ 11456592 (+)
LOC120553760 NA coding downstream 757832 11812027 ~ 11822653 (+)
LOC120553761 NA coding downstream 760918 11815113 ~ 11822653 (+)
LOC120553244 LOC103365396,LOC108235086,LOC101484317,LOC107085982 coding downstream 772114 11826309 ~ 11836976 (+)
G227204 NA non-coding upstream 32097 11011114 ~ 11011315 (+)
G227184 NA non-coding upstream 67098 10956484 ~ 10976314 (+)
LOC120553015 NA non-coding upstream 75164 10967639 ~ 10968248 (+)
G227177 NA non-coding upstream 107667 10935104 ~ 10935745 (+)
LOC120553495 NA non-coding upstream 115558 10914935 ~ 10927854 (+)
LOC120553063 NA non-coding downstream 37995 11092190 ~ 11092674 (+)
G227221 NA non-coding downstream 132744 11186939 ~ 11187782 (+)
G227251 NA non-coding downstream 405918 11460113 ~ 11460500 (+)
G227267 NA non-coding downstream 570040 11624235 ~ 11627943 (+)
G227338 iqsec3 non-coding downstream 935905 11990100 ~ 11992952 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other upstream 57211 10948285 ~ 10986201 (+)
G227141 dcn,LOC103382665 other upstream 305909 10732069 ~ 10737503 (+)
G227121 kera other upstream 343694 10697254 ~ 10699718 (+)
ndufb2 ndufb2,LOC102790702 other upstream 1802063 9237226 ~ 9241349 (+)
lhfpl3 lhfpl3,LOC101483460 other upstream 1870192 9134594 ~ 9173220 (+)
G227216 NA other downstream 48641 11102836 ~ 11112905 (+)
G227278 LOC104928793 other downstream 634974 11689169 ~ 11757317 (+)
st8sia1 st8sia1 other downstream 1052757 12106952 ~ 12126545 (+)
plxna4 plxna4 other downstream 1605073 12659268 ~ 12910189 (+)
nrf1 nrf1,LOC103372774 other downstream 1951144 13005339 ~ 13022947 (+)

Expression


Co-expression Network