G227221


Basic Information

Item Value
gene id G227221
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 11186939 ~ 11187782 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU308216
tttaaacaaataaaaaactgaaatattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtggcttggggtatgtctctatcagttttgcacatcgagagactgacatttttgcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcgtttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctgtatatgtttatttgtgaaccattccattgtagattttgctttatgttttgaatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccactatgtttgacagtggggatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcgattttggtttcatctgaccacagcaccttcttccacatgtttggtgtgtctcccaggtggcttttggcaaactttaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcagtatacgactgattgttgtcctatggacagagtctcccagctcagctgtagatctctgcagttcatccagagtgatcatgggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308216 True 844 lncRNA 0.43 1 11186939 11187782

Neighbor

gene id symbol gene type direction distance location
LOC120553009 NA coding upstream 163181 11019226 ~ 11023758 (+)
si:dkeyp-38g8.5 NA coding upstream 512888 10672048 ~ 10674051 (+)
scyl2 NA coding upstream 527928 10648321 ~ 10659011 (+)
depdc4 depdc4 coding upstream 543168 10638588 ~ 10643771 (+)
anks1b anks1b coding upstream 664702 10288477 ~ 10522237 (+)
lrrc4.1 LOC104918788,LOC103365345,LOC100694050 coding downstream 174981 11362763 ~ 11367955 (+)
pax4 NA coding downstream 265678 11453460 ~ 11456592 (+)
LOC120553760 NA coding downstream 624245 11812027 ~ 11822653 (+)
LOC120553761 NA coding downstream 627331 11815113 ~ 11822653 (+)
LOC120553244 LOC103365396,LOC108235086,LOC101484317,LOC107085982 coding downstream 638527 11826309 ~ 11836976 (+)
LOC120553063 NA non-coding upstream 94265 11092190 ~ 11092674 (+)
G227217 NA non-coding upstream 132744 11043412 ~ 11054195 (+)
G227204 NA non-coding upstream 175624 11011114 ~ 11011315 (+)
G227184 NA non-coding upstream 210625 10956484 ~ 10976314 (+)
LOC120553015 NA non-coding upstream 218691 10967639 ~ 10968248 (+)
G227251 NA non-coding downstream 272331 11460113 ~ 11460500 (+)
G227267 NA non-coding downstream 436453 11624235 ~ 11627943 (+)
G227338 iqsec3 non-coding downstream 802318 11990100 ~ 11992952 (+)
G227363 NA non-coding downstream 1055752 12243534 ~ 12243755 (+)
G227499 NA non-coding downstream 1799931 12987713 ~ 13043018 (+)
G227216 NA other upstream 74034 11102836 ~ 11112905 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other upstream 200738 10948285 ~ 10986201 (+)
G227141 dcn,LOC103382665 other upstream 449436 10732069 ~ 10737503 (+)
G227121 kera other upstream 487221 10697254 ~ 10699718 (+)
ndufb2 ndufb2,LOC102790702 other upstream 1945590 9237226 ~ 9241349 (+)
G227278 LOC104928793 other downstream 501387 11689169 ~ 11757317 (+)
st8sia1 st8sia1 other downstream 919170 12106952 ~ 12126545 (+)
plxna4 plxna4 other downstream 1471486 12659268 ~ 12910189 (+)
nrf1 nrf1,LOC103372774 other downstream 1817557 13005339 ~ 13022947 (+)
yeats4 yeats4 other downstream 2286767 13474549 ~ 13479115 (+)

Expression


Co-expression Network