G227295


Basic Information

Item Value
gene id G227295
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 11498844 ~ 11500914 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU308317
cagcATTTGGCTCCACCCTGGTCTTGTTCTGCTGGGGGGGGATCTGATTGGCCAGCATGATGTTTGAATGCACTACTCAATCTGTATGATTGGTTCAAGCCATGTATGATTCACTATTATTTAAGGACCATACCAGTAATTTTTGACCAATTACTACAAATGATAAATACTTATTACTGCTGAGTATTTTGCAAACCATGTTGTAGTGTTTCAGATTTTCATCCACACCAATTTGGTTCAGACTGAACTCACCTACTATTAAATGGATTTTCATGAAATTTGTATGAATTGCGATCAATGGATTTTTCATCTAGTGCCagcatcaggtcaaaatttcaatttgtccAATAACTTGGTTCATGACTAACCTGCACAACTGGAATTCCCATTAGCACCAGCTTTGTGTTtagtttaaaggtcctatgacatgctgcttttttgatgcttttatataggcctcagtggtcccctaatactgtatctgaagtcccttttccaaaattcagccttggtgcagaattacagccactagagccagtcccacaatgagctttccttagtatgtgccatttatgtgtctgtagctttaaatgctattgaggaggagagaggggggcaaggtggagggtcggggtgtggtcttgaccaactgccatgcttcgctcgttTGCAATCTatgatttctctctctttctcatgggtgggccaaattctctgggcggacaaagcagagaaaggggaggtaacctttccccttatgacctcataaggagcaagattccagatcggcccatctgagctttcattttttcaaaggcagagcaggatacccagggctcggtttaaacctatcaccatttctagccactgggggaccatagacaggctaggggaactcatattaatgtttaaaaaaaactcataaagtgaaatattcatgccatgggacctttttaatgcTAAAATAATGTTAGCCAGCTAACACGCTCAACAAAAATGGAGAACACATAGACATTAATTGTTTaaaatcagcatgttagcattgacATTGAGCATTTAGCTcgaagcaccactgtgcctgaGTACAGCCTCACACTGCTAACATGGCTGTAGCCTCTGGTCTTGTTTGTGTGGTTTCCTACTGTGTTTTGTGCACTTCCATTCATTTGCATACAGTATGAAAAGGAAATTGTAGAGTCTAGAAGCTTTTCATGCAAGTTTGAGGAGTTTGCTAATTGATTTTAAGCTGTGCAAAAATTAATTGAAAACAATGGCTgtgaaaagtaaaagaaaataactTCAAATATGGGGAAAAGTGGAAATAGTCAGCAGTAATAGCCtaataaaaatacacaaattGTAGTTAAGAagctaaaattgcaaaaactCTGGCATGGTCTTTATAAGTCACTTTGGGCAGAGATGTACAGTACAGACATTAAATGagtgaaaatacacacaatcTAAAATTATCCGACTGGATGCTTTTTAGAAATGCacagaaaacattggagaatgAACATGAGCTCCGTAGTTGTCCAGATGTTCCATTCTACTCTTCAAGTGCTAAAATCAGATGCTGTCACTTCAGGAATAATATAGTCCTGATGtaatatgaatttttttttgacTCTGTTGGTGCTCTCTGTATGAATTGTGTGGGTTGGCCTTTTTATTTCTGGAATCTTGAGGATTgcttaatgtgtgtttttgtgtctgtaacCTTGCTGCCACTCTTTGGCAGACGATTGGCAGGCCTGTCAGTCAATCTTTCTCTGCCTTCGGTTTTAAGGCAGGCTCTTGATGAAGGCGTCCACCAAGTCGCCCCTCGCCAGACTCTGTTTTGGCAGAGTCTTGGTGGGCCTCTCTGTCAGTCTCCCTCAATTGTGCTTTAACAAGTTACACTTCAGTGGAACTTGATTCTCCAAAATCAGTTatgtaaaaaaactgtaacaaaactAATGTTGTTctcagcaaaaagaaaaaagaaccaTGTTTATAATCCCGGCCGGAAAAACATGTTTAGTCATGTGCAAATAAGGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308317 True 2045 lncRNA 0.40 2 11498844 11500914

Neighbor

gene id symbol gene type direction distance location
snd1 snd1 coding downstream 50402 11269994 ~ 11448442 (-)
LOC120553011 LOC104968093,LOC103355170 coding downstream 488739 10987010 ~ 11010105 (-)
si:dkey-159a18.1 LOC104968091,LOC103355173 coding downstream 566201 10916702 ~ 10932643 (-)
fam3c fam3c,LOC103355174 coding downstream 582267 10910337 ~ 10916577 (-)
btg1 btg1 coding downstream 647033 10842572 ~ 10851811 (-)
cacna2d1a LOC103382776 coding upstream 2704 11503618 ~ 11604688 (-)
LOC120553596 LOC104928793,LOC103358497,LOC104955051,LOC101485526 coding upstream 188213 11689127 ~ 11722935 (-)
tspan11 tspan11,LOC104963016,LOC100694590,LOC102793394 coding upstream 288281 11789195 ~ 11807667 (-)
ccdc59 LOC104955171 coding upstream 348150 11849064 ~ 11852957 (-)
LOC120553247 NA coding upstream 433214 11934128 ~ 11936367 (-)
G227248 NA non-coding downstream 231055 11267586 ~ 11267789 (-)
G227222 NA non-coding downstream 245989 11252624 ~ 11252855 (-)
G227218 NA non-coding downstream 407227 11091390 ~ 11091617 (-)
G227215 NA non-coding downstream 467839 11029844 ~ 11031005 (-)
G227211 NA non-coding downstream 474964 11023408 ~ 11023880 (-)
G227314 NA non-coding upstream 311569 11812483 ~ 11822704 (-)
G227384 NA non-coding upstream 330115 11831029 ~ 11831677 (-)
LOC120553249 NA non-coding upstream 394729 11895643 ~ 11906820 (-)
LOC120553250 NA non-coding upstream 443416 11944330 ~ 11949201 (-)
G227407 NA non-coding upstream 465738 11966652 ~ 11969478 (-)
hgfa LOC103365344,LOC104958230 other downstream 16266 11458581 ~ 11482578 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other downstream 517585 10980198 ~ 10981259 (-)
G227082 anks1b other downstream 975882 10513494 ~ 10522962 (-)
dram1 dram1 other downstream 2684404 8809393 ~ 8814440 (-)
ppfia2 ppfia2 other downstream 2704934 8565242 ~ 8793910 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other upstream 116441 11617355 ~ 11676832 (-)
cracr2ab LOC102301749,LOC103365394 other upstream 336334 11837248 ~ 11848941 (-)
G227429 LOC104958361,LOC103370548 other upstream 784012 12284926 ~ 12288154 (-)
ube2h ube2h,LOC107690610,LOC107676921,LOC105888480 other upstream 1537237 13038151 ~ 13066528 (-)
cacna1c cacna1c,LOC103459268,LOC106922075,LOC101471946 other upstream 1625254 13126168 ~ 13344461 (-)

Expression


Co-expression Network