G227429 (LOC104958361,LOC103370548)


Basic Information

Item Value
gene id G227429
gene name LOC104958361,LOC103370548
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 12284926 ~ 12288154 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU308500
CTTAACAGAGTATGCCAGGGAGATTGTTACAGCAAGTGGCAGGCCTTCGGGAACAGCCACCACCAGAACAGTGACGCCGATGATGAAAAACTTCACAAAGAACTGAATATAAATGGGTGTGCATTCCTTGACCCAGGGCAGATTCTGGATCCAGAATGTGTCTACTACAAACAGCACCACCAGGATAATGACCGTGATGGCTGACATAACCAGTCCTGCTTTGCCAATCTGTACAGCTAGTTTGGTCAGTTTGCCCTGGAGAACAGACTTCTCTTTCTTTGACATGCtggatttctttttctcctctgccTCAGCCTCATCACTGTTCAGTGGCTGCATTTCCATTGCAGCACCATCCTGGGCTTTAGcttTCTTACGGCTCTCCACTGCTGCATCCTGCTTGTCTttttctctgtttcttcttctcctccttttcctttttcttttcctcttcatcttcttcatcatcttcactggTCCCAAGTAAAGTGAAGATAATTCCAGTTTGAGAGTTGACACCCACAGCAGTGACCAACATTTTCCCTGAGCCTTCCATTACATGAG

Function

NR:

description
PREDICTED: plasma membrane calcium-transporting ATPase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308500 True 564 TUCP 0.46 4 12284926 12288154

Neighbor

gene id symbol gene type direction distance location
LOC120553762 LOC103374597,LOC102209562,LOC104923710,LOC101480655,LOC100694855 coding downstream 186621 12093538 ~ 12098305 (-)
iqsec3a iqsec3,LOC102789444,LOC102305902 coding downstream 201136 11981998 ~ 12083790 (-)
LOC120553245 parp11,LOC103365400,LOC100707536,LOC107085973,LOC102790985,LOC101482593,LOC104955166 coding downstream 341687 11936414 ~ 11943239 (-)
LOC120553247 NA coding downstream 348559 11934128 ~ 11936367 (-)
ccdc59 LOC104955171 coding downstream 431969 11849064 ~ 11852957 (-)
copg2 copg2 coding upstream 27993 12316147 ~ 12325770 (-)
ucn3l LOC103371858,LOC106936223,LOC103146475,LOC103460978 coding upstream 39512 12327666 ~ 12329999 (-)
si:dkey-117n7.5 LOC103382769,LOC107385417 coding upstream 45790 12333944 ~ 12349260 (-)
col7a1l LOC103371861,LOC108235101,LOC106515058 coding upstream 65490 12353644 ~ 12412870 (-)
lrguk NA coding upstream 127660 12415814 ~ 12433137 (-)
G227407 NA non-coding downstream 315448 11966652 ~ 11969478 (-)
LOC120553250 NA non-coding downstream 335725 11944330 ~ 11949201 (-)
LOC120553249 NA non-coding downstream 378106 11895643 ~ 11906820 (-)
G227384 NA non-coding downstream 453249 11831029 ~ 11831677 (-)
G227314 NA non-coding downstream 462222 11812483 ~ 11822704 (-)
G227488 NA non-coding upstream 351280 12639434 ~ 12639775 (-)
LOC120553123 NA non-coding upstream 612160 12900314 ~ 13004473 (-)
G227627 cpsf6 non-coding upstream 1119682 13407836 ~ 13454828 (-)
G227629 cacna2d4a,cacna2d4 non-coding upstream 1151838 13439992 ~ 13441507 (-)
G227636 NA non-coding upstream 1175956 13464110 ~ 13472016 (-)
cracr2ab LOC102301749,LOC103365394 other downstream 435985 11837248 ~ 11848941 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other downstream 608094 11617355 ~ 11676832 (-)
hgfa LOC103365344,LOC104958230 other downstream 802348 11458581 ~ 11482578 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other downstream 1303667 10980198 ~ 10981259 (-)
G227082 anks1b other downstream 1761964 10513494 ~ 10522962 (-)
ube2h ube2h,LOC107690610,LOC107676921,LOC105888480 other upstream 749997 13038151 ~ 13066528 (-)
cacna1c cacna1c,LOC103459268,LOC106922075,LOC101471946 other upstream 838014 13126168 ~ 13344461 (-)
LOC120553407 napepld,LOC106940535 other upstream 1197732 13485886 ~ 13508247 (-)
LOC120553470 wnk1 other upstream 1228353 13516507 ~ 13617756 (-)
LOC120553486 NA other upstream 1355429 13643583 ~ 13659272 (-)

Expression


Co-expression Network