G227488


Basic Information

Item Value
gene id G227488
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 12639434 ~ 12639775 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU308577
CTTGAGGCTACCCCCGGTGACAGGATCTTACCGAGACGTGTCAATTGTTTCCAAACTACAGCAATACTCGTTCTTTGTCTTAATCACGTCTGGGGATGGCTCCCCTAAAAGAGACAAaagttacctttcctgtggggacaatgagtctcctacagtatgtagtatgtaataacagccatgacctaatcaattctttagaagctacagacggtgtgagccagacaaatgctgatcaggcttaatcagtattgaaacattccttcactcagttacacaacagtttacattttttaagttacattttttaccttaaagtacattgttttcaaaacgTAACTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308577 True 342 lncRNA 0.39 1 12639434 12639775

Neighbor

gene id symbol gene type direction distance location
exoc4 exoc4 coding downstream 84771 12433896 ~ 12554663 (-)
lrguk NA coding downstream 206297 12415814 ~ 12433137 (-)
col7a1l LOC103371861,LOC108235101,LOC106515058 coding downstream 226564 12353644 ~ 12412870 (-)
si:dkey-117n7.5 LOC103382769,LOC107385417 coding downstream 290174 12333944 ~ 12349260 (-)
ucn3l LOC103371858,LOC106936223,LOC103146475,LOC103460978 coding downstream 309435 12327666 ~ 12329999 (-)
zc3hc1 zc3hc1 coding upstream 427638 13067413 ~ 13075321 (-)
cax1 LOC103382807 coding upstream 443465 13083240 ~ 13094167 (-)
smo smo,LOC102780724 coding upstream 459462 13099237 ~ 13108249 (-)
tspan33a tspan33 coding upstream 471305 13111080 ~ 13118409 (-)
lrtm2a lrtm2,LOC103374524 coding upstream 748132 13387907 ~ 13412926 (-)
G227407 NA non-coding downstream 669956 11966652 ~ 11969478 (-)
LOC120553250 NA non-coding downstream 690233 11944330 ~ 11949201 (-)
LOC120553249 NA non-coding downstream 732614 11895643 ~ 11906820 (-)
G227384 NA non-coding downstream 807757 11831029 ~ 11831677 (-)
G227314 NA non-coding downstream 816730 11812483 ~ 11822704 (-)
LOC120553123 NA non-coding upstream 260539 12900314 ~ 13004473 (-)
G227627 cpsf6 non-coding upstream 768061 13407836 ~ 13454828 (-)
G227629 cacna2d4a,cacna2d4 non-coding upstream 800217 13439992 ~ 13441507 (-)
G227636 NA non-coding upstream 824335 13464110 ~ 13472016 (-)
G227637 yeats4 non-coding upstream 835364 13475139 ~ 13477724 (-)
G227429 LOC104958361,LOC103370548 other downstream 351280 12284926 ~ 12288154 (-)
cracr2ab LOC102301749,LOC103365394 other downstream 790493 11837248 ~ 11848941 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other downstream 962602 11617355 ~ 11676832 (-)
hgfa LOC103365344,LOC104958230 other downstream 1156856 11458581 ~ 11482578 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other downstream 1658175 10980198 ~ 10981259 (-)
ube2h ube2h,LOC107690610,LOC107676921,LOC105888480 other upstream 398376 13038151 ~ 13066528 (-)
cacna1c cacna1c,LOC103459268,LOC106922075,LOC101471946 other upstream 486393 13126168 ~ 13344461 (-)
LOC120553407 napepld,LOC106940535 other upstream 846111 13485886 ~ 13508247 (-)
LOC120553470 wnk1 other upstream 876732 13516507 ~ 13617756 (-)
LOC120553486 NA other upstream 1003808 13643583 ~ 13659272 (-)

Expression


Co-expression Network