G227717


Basic Information

Item Value
gene id G227717
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 13797584 ~ 13801503 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU308952
aaaaagacaaaaaaaaaaaaaaaaaaagtcagtccCATATctaaggtgtgtgtgagtgtggggtCATCAGACGATTAAGGGGATGAGAAAGAATATTTTTCTGACGGTCCTTCATTAGtttgctttttttgtcttcttgtgAATTGCTGAATATGTTCCTCTCTTCCAGCCGATAAAAATccttcaaaaaaagaaacatgagaAAGAAAAATCACCATTTGGTTAAACTGCTCCCAAGTCAAAAAGGTTGGGAGCTCTCACCTGTGAAACATTTGACTGAGATTAAATGACAGAATCCTTTCACAATAAAGTAAAGATAAATCcatattttattctattctcTCATTTTTAATCCACAACGAAGTCGCGGTTAGTTGCGGTCATCACCGCTTCCAAACATTATCAGTATAAAACAGACaacaaaatactgaaattacAACACAAGCTCATATCTGATGAAGTTtaattccaaaataagagccatTTGTCAAATCCTCATGATTTGTTTGAAGCTTTTAGCTATTTCAAACTGGTAACATTTGACGAACCTGAACCTCAAGTAATATTTTGGAATGAAACTCCTCATTTGCTTTTTAATACACAGCTTAGGTGCCGAAAAtgaaacctgtttttttttttttgggcttctTTGGATGGTGTTAAATTAGATTTGAGTGTGCCGTGTAAATCCCCCTCTTTAGGTTTGTCTCCACCAGGTATTTTTATTAAAGGAGCAGCGCTAAACAGTTGCATGTTGCCAGTCATGGCTTCAGCACTCACTACAGTATAAgactaaaaaacaacaacaacaacaacaaaactgttaGAGGAGGTTTTGattgaagttgaaaaaatttGAACCTCTAGTGCTGTTAGCGTTTTAATCATGCTAAGACTGTCAGCGCTGTGGGAAACATGCATCAGAGTGTCATTTCCACTGTAAACAACAAGAACAAGAAACTGATTCTGTGAAAATGTTCCCGGTGGACACAGAGCCTCGTGTCGGTGCAATATACGTTCCCAGTGACAGGTAACAGTCTCCTGCTTATGGAACCAATCTGTGGTTACTtgcaaatcacaaaaaaagaaaagacgtTTTGACA

Function

NR:

description
PREDICTED: uncharacterized protein LOC105030512

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308952 True 1103 lncRNA 0.37 2 13797584 13801503

Neighbor

gene id symbol gene type direction distance location
lrtm2a lrtm2,LOC103374524 coding downstream 384658 13387907 ~ 13412926 (-)
tspan33a tspan33 coding downstream 679175 13111080 ~ 13118409 (-)
smo smo,LOC102780724 coding downstream 689335 13099237 ~ 13108249 (-)
cax1 LOC103382807 coding downstream 703417 13083240 ~ 13094167 (-)
zc3hc1 zc3hc1 coding downstream 722263 13067413 ~ 13075321 (-)
trnak-cuu_13 NA coding upstream 8104 13809607 ~ 13809679 (-)
fbxl14b fbxl14,LOC100698480,LOC103368248,LOC101486866,LOC106521787,LOC108235106,LOC107094604,LOC104959755 coding upstream 61276 13862779 ~ 13866499 (-)
LOC120553476 phtf2 coding upstream 155157 13956660 ~ 14001984 (-)
LOC120553471 rsbn1l,LOC104950472,LOC102308177 coding upstream 207214 14008717 ~ 14047664 (-)
ptpn12 ptpn12 coding upstream 252063 14053566 ~ 14106120 (-)
G227692 LOC108235098,LOC103459282 non-coding downstream 61882 13729477 ~ 13735702 (-)
G227637 yeats4 non-coding downstream 319860 13475139 ~ 13477724 (-)
G227636 NA non-coding downstream 325568 13464110 ~ 13472016 (-)
G227627 cpsf6 non-coding downstream 342756 13407836 ~ 13454828 (-)
G227629 cacna2d4a,cacna2d4 non-coding downstream 356077 13439992 ~ 13441507 (-)
G227784 NA non-coding upstream 148038 13949541 ~ 13949881 (-)
G227804 NA non-coding upstream 338676 14140179 ~ 14143259 (-)
LOC120553016 NA non-coding upstream 377242 14178745 ~ 14219598 (-)
G227814 NA non-coding upstream 430040 14231543 ~ 14231806 (-)
G228019 NA non-coding upstream 968495 14769998 ~ 14770247 (-)
LOC120553486 NA other downstream 138312 13643583 ~ 13659272 (-)
LOC120553470 wnk1 other downstream 179828 13516507 ~ 13617756 (-)
LOC120553407 napepld,LOC106940535 other downstream 289337 13485886 ~ 13508247 (-)
cacna1c cacna1c,LOC103459268,LOC106922075,LOC101471946 other downstream 453123 13126168 ~ 13344461 (-)
ube2h ube2h,LOC107690610,LOC107676921,LOC105888480 other downstream 731056 13038151 ~ 13066528 (-)
waslb LOC103370764 other upstream 622734 14424237 ~ 14450589 (-)
grm8a grm8 other upstream 832607 14634110 ~ 15053285 (-)
znf800b znf800,LOC103364713,LOC103355189,LOC108412280 other upstream 1253972 15055475 ~ 15089983 (-)
G228191 NA other upstream 1969735 15771238 ~ 15791853 (-)
G228291 LOC103356441,LOC102298269,LOC102212027 other upstream 2947339 16748842 ~ 16823432 (-)

Expression


Co-expression Network