G227734


Basic Information

Item Value
gene id G227734
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 13956697 ~ 13965492 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU308978
AGACCTTGTAGACAGACCAGTTCACAAAAAAGTTTAATATTCAGACTCTTTGAAACAGAAACACATGGAGTCTTTTACCTAGATTAATTTCCATACATACATTTCAAACTTATTTGTTCCTTTAAAACACAGTAAAACGTGCATCTCCTTTCCCACAAGCGTGAGAAACAACCTTTACAAATGAATTATGAAAGAACAAAAAGCACACAATAATACAACTTAAAGTATTTCCAAAgggaaacaaatatattttaaagcatAGTACTGCAAATACATTCTTTTTTCCAGCAGAGACAAAACTCAAATAAGCACTTTGGTCTTCCTCCTCAAATACACTGAAGCTGATTATGCTAgcatttttatgaatgaaagtCCGATAGCTGAGgcaacattttaatcacatttaaGATATTTTCTGTGGGTATGATAACTGCATGTACCATGTGGGATTTACTACAGCGAGTGATGTGAATTGTCGATCCAATATTCTTAAATTCAGAGCTAGCATTCGCTTGAACAGCAAATGCATACTGTGTCAAGCAGCTGAGGTACAAATCAATTTCTCTGGACATTGAAACAAGATGTTACTTCTACCTTTCTATTTTATATCTGTTTTTAAAGTGCATTTTCTTTATTCGTGTTTAACTGGAGTGTTTAGGAACCTGTGACGGACTGACTTTACTTGTCATGCGCATGAATCTACCGTCTAATTAGCTCTGAGAGTTTGATATCAAATTCTGTACAAAATCCACAGAATTTCTAAACTGGTGACATGATGGAACAGTTTAATCTTGGCTGACACAAACTGACCAATCAGACAGtcgaaaacattttttttccccaagagCTAAACTCTTCATGCTGCTATGATATATGCAGGTGTTCAACCAAACTGCAACTAAGCTACAATACTAAAATAATTCCTCATTTTTGTCAGAGGAGCTCCAAAAAGCTAGATTGAATTTTTTTGTAGTACTATATCATTACTTATTTTAGAATAGAACAATACATTGTGTCCAAAATCACCCTCTCATTCACTATTTTCTATAGATTATACACCCAATAGTTTCATCTATAGCAAATGGTAAATTCATATTTCTATATAGAGCAAACATTTCAGACAGTTTCAGTTAGACACAAATCTgtgtaaactcaaacaaaatcaacaaatcaGGAACTGAAACAAGAAAACACCTGACTCAGATCTTATACAAAAAGGAAGTGATCGTATGTTTACCAATTTAGGAAGTAGTTTTGCATGCAGGGAATAAGCCAATGTCCTAATATTTGCACTTAACCAAAGTCGTACACACTCAGCTAGCAgtcattttaaccatgtttctACCTACAGTACGCGTATTACTGGAAATACTGTCAAATGATATTGGTCATGAAATCAAAACTCTGTGAAGGGGTCTTTTTAAAACTTAAGAGTTGTCTGTCAATGTCAcctattatgtttttttcattaaCTGGATGATTGTTTCTTTGCAGTGCCAATGTCGTCTGGCTTTTCACCTCTCCCCAGTGAGAACAAAACCTAGCAACAATTTTATCAGTGAGCAGTATGGAGGTGTTGCTGTACTTCTTGCTGGTCTCAGAGCCCAGCGTGACGAACCTGAGCAGGAACAGAGACAGACTGGAGCACCAGATCACCAGCTCCCAGTTATAGTGACACTCCAGGAACGTTTCATGGATGTGGAGCAACTGGAGGAAGAGATGTCCTCTCTGCGACACTGAGCAGGAAGAAAAAGAGCCATATAAGGCAGACGCGCACCAGGAAGCTAAGTGTTACCATGGTGATGACCAAGGCGTCTGATCCAGACCCGCCTCCCAGCGCCACAGACAGCATCTCATTGGCTGAGAGTGTGGTCAGCTGATCAAAGTCACGGTACTGAGCCAGCCTGCAGGAGATGGAGAAAGACTGGCGATGATCTGCACTCTGCACAGTGAAGGAAGTCTTCCCACATCAGGTCCTCGGTCTCAGACTCGTGTCGAGTGCTCTCCGAGTCATGAGTCCTCAGACTGGAACATCTGGAGCTGCAGCTGGTGCCGGACTTGGGCACGTCctccGCTGCGTAGTGTTTCTTGTAGTGGTGTGTATTCTTGCGGTTTCTGAGCGTACAGTCGCTGTTCATTCTTTCAACTCCCCTGCGGAGTGCGCTGTAGGATGCTTCAGGGTCCTCCTCACTGGATGCCTCATCTGATGCTGGCTCCTTATTGGCGCTTGCCAACGTCAGTCCCGGGCTGCGGGGTGCGTGAGTGTGTACGGACTGGACGTGAGAGTTCCAGCACACCTCGTCAGCCCTGTTTAGCGACTCACATCGCTGCTCATGGAGCTGAAGCCCCTCCTCGCTGCTCCGATTGGTCACGCGGCCGTCCAGCGACACGTAGCCGTTGTCTGTCTCTGTCGACTTGTCGATGGACAGTTTGGACTTCTTAGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308978 True 2446 lncRNA 0.42 6 13956697 13965492

Neighbor

gene id symbol gene type direction distance location
adipor2 adipor2 coding upstream 17418 13902858 ~ 13939279 (+)
wnt5b LOC101487154,LOC102306408,LOC100690824,LOC102798286 coding upstream 61696 13802193 ~ 13895001 (+)
trnak-cuu_14 NA coding upstream 121696 13834929 ~ 13835001 (+)
trnal-caa_24 NA coding upstream 122366 13834221 ~ 13834331 (+)
trnal-caa_23 NA coding upstream 123548 13833039 ~ 13833149 (+)
LOC120553474 NA coding downstream 171699 14137191 ~ 14144663 (+)
LOC120553478 NA coding downstream 179289 14144781 ~ 14159988 (+)
LOC120553477 NA coding downstream 194585 14160077 ~ 14167596 (+)
ints13 asun coding downstream 402428 14367920 ~ 14374654 (+)
asb15b LOC103373124 coding downstream 432231 14397723 ~ 14413015 (+)
G227662 NA non-coding upstream 401871 13554250 ~ 13554826 (+)
G227646 NA non-coding upstream 425150 13516482 ~ 13531547 (+)
G227639 NA non-coding upstream 462836 13493401 ~ 13493861 (+)
G227510 zc3hc1 non-coding upstream 881349 13071545 ~ 13075348 (+)
G227499 NA non-coding upstream 913679 12987713 ~ 13043018 (+)
G227736 phtf2 non-coding downstream 2051 13967543 ~ 13969687 (+)
G227743 NA non-coding downstream 50606 14016098 ~ 14054224 (+)
G227742 rsbn1l non-coding downstream 66903 14032395 ~ 14046985 (+)
LOC120553487 NA non-coding downstream 150251 14115743 ~ 14116336 (+)
G227811 NA non-coding downstream 253817 14219309 ~ 14219604 (+)
trnal-caa_22 NA other upstream 154494 13802093 ~ 13802203 (+)
trnal-caa_21 NA other upstream 154937 13801648 ~ 13801760 (+)
LOC120553473 LOC102193240,LOC101463811,LOC103146510,LOC103459282,LOC106521789,LOC108235098 other upstream 158317 13674804 ~ 13798380 (+)
trnak-cuu_12 NA other upstream 181638 13774987 ~ 13775059 (+)
trnal-caa_20 NA other upstream 186520 13770066 ~ 13770177 (+)
LOC120553485 tmem60,LOC101486292,LOC104924613,LOC103382814,LOC100699021 other downstream 36640 14002132 ~ 14004905 (+)
LOC120553353 spam1,LOC103370765,LOC102199515,LOC101470336,LOC102310263 other downstream 489101 14454593 ~ 14462474 (+)
LOC120553256 gsap,LOC102790605 other downstream 1203112 15168604 ~ 15203041 (+)
lrrc17 LOC103355197,LOC103382847 other downstream 1335030 15300522 ~ 15331178 (+)
prickle1b prickle1 other downstream 1476493 15441985 ~ 15471887 (+)

Expression


Co-expression Network