G227804


Basic Information

Item Value
gene id G227804
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 14140179 ~ 14143259 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU309104
GAAAGAGATGCTCACCACCATCACCTGGCTCTGCAGCTTCTGAACGTGGAGAAGAAGTGAGGGGTGACAGTCCGTACTCAGGCAGCCCACAGTCTGGTTCAATGGAACTGTTGTCAGTCTCTTCATCATCCTCACAAATATCTTCTGCTCTCCAGCTGTTTTCTTGCTTCACCGTCATCTGTACTGACTTCTCTCGATTTCTTCCCTGTGATTTCCCAGTGCCTTGTTTGCCCTCTCCCTGATCCATTATTTGATCCTGATCTTCAGATGTCGGTGAAGTCTGTTTAGAGGCGAGCGTGGAGAGGATGGTGTCTGACATGAAGGTGAATTCAATTTTAGTCAACTTTTGTCGCTCCTGTTGGTGCTGCAAAATCCTCTTCAGATCCTCAGGGTCGGAGAGAAACTGCTCAAACTCCTCGTCAAGGGAAGAAATGTCAAACATGGAGCACACCTGGAAAAGAAGAATAAGTGGATTTTAAACACAAACTGCTGCTCCTTCTTCCAAGATCATCCTCTGCTATGTGGATTGACATTTATAATCTGTTGTTGTTGAATTCTGACTGTGTAAGAATTCTAAAGTGATGCAAAGAAAAAGCTATTTTGGCCCCTGCACttctgaaacatttttattctaCAAGCCATTACTACACGATGGCTGACTTAGGGTGTGTATTCTGACTTTTCATTTTGTTACAAACCAAAATTACAGTTGTGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU309104 True 718 lncRNA 0.43 2 14140179 14143259

Neighbor

gene id symbol gene type direction distance location
ptpn12 ptpn12 coding downstream 34059 14053566 ~ 14106120 (-)
LOC120553471 rsbn1l,LOC104950472,LOC102308177 coding downstream 92515 14008717 ~ 14047664 (-)
LOC120553476 phtf2 coding downstream 138195 13956660 ~ 14001984 (-)
fbxl14b fbxl14,LOC100698480,LOC103368248,LOC101486866,LOC106521787,LOC108235106,LOC107094604,LOC104959755 coding downstream 273680 13862779 ~ 13866499 (-)
trnak-cuu_13 NA coding downstream 330500 13809607 ~ 13809679 (-)
rassf8b rassf8,LOC103358112 coding upstream 98738 14241997 ~ 14262260 (-)
pkp2 LOC103399101 coding upstream 133593 14276852 ~ 14290030 (-)
nudt4b LOC104951656,LOC104933915,LOC103358110,LOC107384862 coding upstream 147563 14290822 ~ 14309611 (-)
ube2nb LOC104958109,LOC100699741,LOC104932591,LOC101482995,LOC102225258,LOC103382819,LOC107094607,LOC101068996 coding upstream 182838 14326097 ~ 14333939 (-)
mrpl42 mrpl42 coding upstream 191593 14334852 ~ 14338447 (-)
G227784 NA non-coding downstream 190298 13949541 ~ 13949881 (-)
G227717 NA non-coding downstream 338676 13797584 ~ 13801503 (-)
G227692 LOC108235098,LOC103459282 non-coding downstream 404477 13729477 ~ 13735702 (-)
G227637 yeats4 non-coding downstream 662455 13475139 ~ 13477724 (-)
G227636 NA non-coding downstream 668163 13464110 ~ 13472016 (-)
LOC120553016 NA non-coding upstream 35486 14178745 ~ 14219598 (-)
G227814 NA non-coding upstream 88284 14231543 ~ 14231806 (-)
G228019 NA non-coding upstream 626739 14769998 ~ 14770247 (-)
G228020 NA non-coding upstream 627239 14770498 ~ 14770967 (-)
G228021 NA non-coding upstream 631058 14774317 ~ 14774848 (-)
LOC120553486 NA other downstream 480907 13643583 ~ 13659272 (-)
LOC120553470 wnk1 other downstream 522423 13516507 ~ 13617756 (-)
LOC120553407 napepld,LOC106940535 other downstream 631932 13485886 ~ 13508247 (-)
cacna1c cacna1c,LOC103459268,LOC106922075,LOC101471946 other downstream 795718 13126168 ~ 13344461 (-)
ube2h ube2h,LOC107690610,LOC107676921,LOC105888480 other downstream 1073651 13038151 ~ 13066528 (-)
waslb LOC103370764 other upstream 280978 14424237 ~ 14450589 (-)
grm8a grm8 other upstream 490851 14634110 ~ 15053285 (-)
znf800b znf800,LOC103364713,LOC103355189,LOC108412280 other upstream 912216 15055475 ~ 15089983 (-)
G228191 NA other upstream 1627979 15771238 ~ 15791853 (-)
G228291 LOC103356441,LOC102298269,LOC102212027 other upstream 2605583 16748842 ~ 16823432 (-)

Expression


Co-expression Network