G227935


Basic Information

Item Value
gene id G227935
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 14521104 ~ 14521760 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU309264
cctgtcccagccatcctgcttgcaagtgtctgctcattaaacaacaagctggactacatcctccttcaacgaaaatcccaacgtgagttcagtgactgctgtgtttttgttgttgtggaaacatgcctgaacaacagtgtaccggaaccgggactatccagctaccaggctgctctcgccggcccgtggaggtgggctgttaaacggactggtgtagaaataaaatccaactagctactgctaactgctggtggagcttgtgactgttaaatgccgaccattcgacattccatgctaattcacggctgtgtttatactctgtgtttagctacaccaatgctagtatgcgttagctgaactttacggatcctgcttgcaagtgtccgctcatttagaccacaaactggactacatccaacttcaacgacactcccaacgtgagttcagagactgccgtgtttttgttgttgtggaaacctgcctgaatagtgtaccggactgtccagctaccaggcctgctagccctccgagctagagatgctctgtcgccaggtaaaagaggtgggctgtgttaacaccgagtggcgcagaaatgtggtgatttgtatccatttaactgctaactgctggtggagtttgtgactgttaaatgccgac

Function

GO: NA

KEGG:

id description
ko04139 Mitophagy - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU309264 True 657 lncRNA 0.49 1 14521104 14521760

Neighbor

gene id symbol gene type direction distance location
lmod2b lmod2 coding upstream 100145 14413543 ~ 14420959 (+)
asb15b LOC103373124 coding upstream 108089 14397723 ~ 14413015 (+)
ints13 asun coding upstream 146450 14367920 ~ 14374654 (+)
LOC120553477 NA coding upstream 353508 14160077 ~ 14167596 (+)
LOC120553478 NA coding upstream 361116 14144781 ~ 14159988 (+)
LOC120553461 NA coding downstream 229020 14750780 ~ 14754250 (+)
fgl2a fgl2 coding downstream 724398 15246158 ~ 15256323 (+)
LOC120553796 LOC104934096,LOC103355199 coding downstream 817079 15338839 ~ 15345725 (+)
pus7l pus7l coding downstream 839169 15360929 ~ 15368119 (+)
zcrb1 zcrb1 coding downstream 969523 15491283 ~ 15493423 (+)
G227896 NA non-coding upstream 92518 14428185 ~ 14428586 (+)
G227895 NA non-coding upstream 93776 14427101 ~ 14427328 (+)
G227875 NA non-coding upstream 142410 14376864 ~ 14378694 (+)
G227874 NA non-coding upstream 145639 14374819 ~ 14375465 (+)
G227843 LOC104958109,LOC100699741,LOC104932591,LOC101482995,LOC102225258,LOC103382819,LOC101068996,LOC107094607 non-coding upstream 187181 14326137 ~ 14333923 (+)
G227948 NA non-coding downstream 248217 14769977 ~ 14770247 (+)
G227949 NA non-coding downstream 252553 14774313 ~ 14774820 (+)
G227950 NA non-coding downstream 272021 14793781 ~ 14796104 (+)
G227970 NA non-coding downstream 532945 15054705 ~ 15057478 (+)
G227972 znf800,LOC102791911 non-coding downstream 538244 15060004 ~ 15060834 (+)
LOC120553353 spam1,LOC103370765,LOC102199515,LOC101470336,LOC102310263 other upstream 58630 14454593 ~ 14462474 (+)
LOC120553485 tmem60,LOC101486292,LOC104924613,LOC103382814,LOC100699021 other upstream 516199 14002132 ~ 14004905 (+)
trnal-caa_22 NA other upstream 718901 13802093 ~ 13802203 (+)
trnal-caa_21 NA other upstream 719344 13801648 ~ 13801760 (+)
trnak-cuu_12 NA other upstream 746045 13774987 ~ 13775059 (+)
LOC120553256 gsap,LOC102790605 other downstream 646844 15168604 ~ 15203041 (+)
lrrc17 LOC103355197,LOC103382847 other downstream 778762 15300522 ~ 15331178 (+)
prickle1b prickle1 other downstream 920225 15441985 ~ 15471887 (+)
yaf2 yaf2,LOC102236902 other downstream 972917 15494677 ~ 15511178 (+)
tmem168a LOC103368481 other downstream 1745376 16267136 ~ 16280061 (+)

Expression


Co-expression Network