G227949


Basic Information

Item Value
gene id G227949
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 14774313 ~ 14774820 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU309280
TTTCGGAGATTGTcggagccgcggtggaggaagtactgaatctcagtacttaaataaaagtacaaataaccagagacatatttactttagtaaaagtagaaggtgtccactaccacaaacaaggcctggcttttaaaaaaaagttcctatcctaaccagcataaaacggaaatgtgttgttagaatcggaatgcggttggttttattcatggatgtattttattttctttaaccatgcaagtaagcaaataaagtgtgtgaagcagcgcaaatggggagatgtgaagaggtccagccaaataaataagatatgaacgcgtcttacgcagcctggcagaggagtaaacgacgctgtggagagaaatagatatagcaactttgatttaaaaacgggaataataaaaacaaacgttttcattttcacttttaccgggggctgtattaccgagggtcagcggcgctgcgcccgggctctggagcaccggagccggcttggatcagcggtgcc

Function

GO: NA

KEGG:

id description
ko04141 Protein processing in endoplasmic reticulum
ko04610 Complement and coagulation cascades
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU309280 True 508 lncRNA 0.43 1 14774313 14774820

Neighbor

gene id symbol gene type direction distance location
LOC120553461 NA coding upstream 20063 14750780 ~ 14754250 (+)
lmod2b lmod2 coding upstream 353354 14413543 ~ 14420959 (+)
asb15b LOC103373124 coding upstream 361298 14397723 ~ 14413015 (+)
ints13 asun coding upstream 399659 14367920 ~ 14374654 (+)
LOC120553477 NA coding upstream 606717 14160077 ~ 14167596 (+)
fgl2a fgl2 coding downstream 471338 15246158 ~ 15256323 (+)
LOC120553796 LOC104934096,LOC103355199 coding downstream 564019 15338839 ~ 15345725 (+)
pus7l pus7l coding downstream 586109 15360929 ~ 15368119 (+)
zcrb1 zcrb1 coding downstream 716463 15491283 ~ 15493423 (+)
gxylt1b gxylt1,LOC103355206,LOC103459445 coding downstream 737029 15511849 ~ 15521235 (+)
G227948 NA non-coding upstream 4066 14769977 ~ 14770247 (+)
LOC120553441 NA non-coding upstream 226886 14500801 ~ 14547427 (+)
G227935 NA non-coding upstream 252553 14521104 ~ 14521760 (+)
G227896 NA non-coding upstream 345727 14428185 ~ 14428586 (+)
G227895 NA non-coding upstream 346985 14427101 ~ 14427328 (+)
G227950 NA non-coding downstream 18961 14793781 ~ 14796104 (+)
G227970 NA non-coding downstream 279885 15054705 ~ 15057478 (+)
G227972 znf800,LOC102791911 non-coding downstream 285184 15060004 ~ 15060834 (+)
G227969 NA non-coding downstream 366392 15141212 ~ 15145198 (+)
G227995 nampt,LOC102790888 non-coding downstream 379309 15154129 ~ 15166209 (+)
LOC120553353 spam1,LOC103370765,LOC102199515,LOC101470336,LOC102310263 other upstream 311839 14454593 ~ 14462474 (+)
LOC120553485 tmem60,LOC101486292,LOC104924613,LOC103382814,LOC100699021 other upstream 769408 14002132 ~ 14004905 (+)
trnal-caa_22 NA other upstream 972110 13802093 ~ 13802203 (+)
trnal-caa_21 NA other upstream 972553 13801648 ~ 13801760 (+)
trnak-cuu_12 NA other upstream 999254 13774987 ~ 13775059 (+)
LOC120553256 gsap,LOC102790605 other downstream 393784 15168604 ~ 15203041 (+)
lrrc17 LOC103355197,LOC103382847 other downstream 525702 15300522 ~ 15331178 (+)
prickle1b prickle1 other downstream 667165 15441985 ~ 15471887 (+)
yaf2 yaf2,LOC102236902 other downstream 719857 15494677 ~ 15511178 (+)
tmem168a LOC103368481 other downstream 1492316 16267136 ~ 16280061 (+)

Expression


Co-expression Network