G227995 (nampt,LOC102790888)


Basic Information

Item Value
gene id G227995
gene name nampt,LOC102790888
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 15154129 ~ 15166209 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU309330
AGATGAATTGACTGTAGTTAGACCCTCGCTGCCTGATGCAGTCTAATTGAATAATACACGCGAGTCATGTCAGGAGCCCCAGTAGTTAACCCGCTATCCATTCTAGGCCCAGaggacaaacaaaacaaacctacCTCCACCCAGTTGGTGAGCCAGTAGCATTCAGGGTCTGTGCTCTCCACTGTGAACAGAACATTGCCTCGAGGAATGACACTCCCCTCTGGCACTGCCTTGATTTCAATAGGAAGGTGTCCATCGTATTTCTCAAAATGTAAGTCCAGCCCTTCTCATTGAAAACATCATCCTGGAAGTGTTCTCTGTATACCTCCTTTGCCTCCTGGATCTTCTCTGGGGTCACTACTTTTCCTTTTAGGTATTTGTTGAGGATGTACTGTAGGCCATAGAAGACGGTTTTGtcatatttgacttttctgCTTTTGGTGGGATCGGTCCGCTTCTCACGGCACTCAAAGTACGAGTACACTTTACTTGTGTTGGGGGGGTACTGTTTGTAATGTGTTACCTTATATGAATCGGTCGCCAACAATATGCTGAAGCCGGAGTCTCTGTGCTCCATCTTTCCCACCTCGGTTGTGAGTGAGTCGCAGCAGTCAGTGTGTTGCGTGCAGTGCTGCCGTGGGACTCCAGCCTGgtagtgta

Function

symbol description
nampt Enables identical protein binding activity. Involved in positive regulation of nitric-oxide synthase biosynthetic process and positive regulation of transcription by RNA polymerase II. Located in cell junction and nuclear speck. Implicated in transient cerebral ischemia. Biomarker of carotid artery disease; coronary artery disease; obesity; pulmonary hypertension; and type 2 diabetes mellitus.

NR:

description
PREDICTED: LOW QUALITY PROTEIN: nicotinamide phosphoribosyltransferase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU309330 True 660 lncRNA 0.48 4 15154129 15166209

Neighbor

gene id symbol gene type direction distance location
LOC120553461 NA coding upstream 399879 14750780 ~ 14754250 (+)
lmod2b lmod2 coding upstream 733170 14413543 ~ 14420959 (+)
asb15b LOC103373124 coding upstream 741114 14397723 ~ 14413015 (+)
ints13 asun coding upstream 779475 14367920 ~ 14374654 (+)
LOC120553477 NA coding upstream 986533 14160077 ~ 14167596 (+)
fgl2a fgl2 coding downstream 79949 15246158 ~ 15256323 (+)
LOC120553796 LOC104934096,LOC103355199 coding downstream 172630 15338839 ~ 15345725 (+)
pus7l pus7l coding downstream 194720 15360929 ~ 15368119 (+)
zcrb1 zcrb1 coding downstream 325074 15491283 ~ 15493423 (+)
gxylt1b gxylt1,LOC103355206,LOC103459445 coding downstream 345640 15511849 ~ 15521235 (+)
G227969 NA non-coding upstream 8931 15141212 ~ 15145198 (+)
G227972 znf800,LOC102791911 non-coding upstream 93295 15060004 ~ 15060834 (+)
G227970 NA non-coding upstream 96651 15054705 ~ 15057478 (+)
G227950 NA non-coding upstream 358025 14793781 ~ 14796104 (+)
G227949 NA non-coding upstream 379309 14774313 ~ 14774820 (+)
G228065 NA non-coding downstream 123978 15290187 ~ 15290508 (+)
G228119 NA non-coding downstream 364922 15531131 ~ 15531439 (+)
G228128 cntn1 non-coding downstream 511146 15677355 ~ 15680269 (+)
G228130 NA non-coding downstream 514164 15680373 ~ 15681491 (+)
G228136 NA non-coding downstream 523699 15689908 ~ 15699902 (+)
LOC120553353 spam1,LOC103370765,LOC102199515,LOC101470336,LOC102310263 other upstream 691655 14454593 ~ 14462474 (+)
LOC120553485 tmem60,LOC101486292,LOC104924613,LOC103382814,LOC100699021 other upstream 1149224 14002132 ~ 14004905 (+)
trnal-caa_22 NA other upstream 1351926 13802093 ~ 13802203 (+)
trnal-caa_21 NA other upstream 1352369 13801648 ~ 13801760 (+)
trnak-cuu_12 NA other upstream 1379070 13774987 ~ 13775059 (+)
LOC120553256 gsap,LOC102790605 other downstream 2395 15168604 ~ 15203041 (+)
lrrc17 LOC103355197,LOC103382847 other downstream 134313 15300522 ~ 15331178 (+)
prickle1b prickle1 other downstream 275776 15441985 ~ 15471887 (+)
yaf2 yaf2,LOC102236902 other downstream 328468 15494677 ~ 15511178 (+)
tmem168a LOC103368481 other downstream 1100927 16267136 ~ 16280061 (+)

Expression


Co-expression Network