G228065


Basic Information

Item Value
gene id G228065
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 15290187 ~ 15290508 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU309415
gccgtccacacggaaacgtttttttgtgcaaacgcacatgttttgcatcgtttgggccgaccgtccagacgaatcctgcaaacgcactgcctgaaaacgcacttttttgaaaccaggtctcagggtgaaaaaatccgaaaacggctctcgtttggcttcgtatggatggtaaatacggatccgtatcgatgaggtcatcgccacacccctcttttacacatagcttttacaccctctcccacggctGCTGACGCAAacaactgcggtgaagctaagcgagcatgtcccatctccatggtcaaaccagctcacttcatctaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU309415 True 322 lncRNA 0.50 1 15290187 15290508

Neighbor

gene id symbol gene type direction distance location
fgl2a fgl2 coding upstream 33864 15246158 ~ 15256323 (+)
LOC120553461 NA coding upstream 535937 14750780 ~ 14754250 (+)
lmod2b lmod2 coding upstream 869228 14413543 ~ 14420959 (+)
asb15b LOC103373124 coding upstream 877172 14397723 ~ 14413015 (+)
ints13 asun coding upstream 915533 14367920 ~ 14374654 (+)
LOC120553796 LOC104934096,LOC103355199 coding downstream 48331 15338839 ~ 15345725 (+)
pus7l pus7l coding downstream 70421 15360929 ~ 15368119 (+)
zcrb1 zcrb1 coding downstream 200775 15491283 ~ 15493423 (+)
gxylt1b gxylt1,LOC103355206,LOC103459445 coding downstream 221341 15511849 ~ 15521235 (+)
akap14 NA coding downstream 468803 15759311 ~ 15759832 (+)
G227995 nampt,LOC102790888 non-coding upstream 123978 15154129 ~ 15166209 (+)
G227969 NA non-coding upstream 144989 15141212 ~ 15145198 (+)
G227972 znf800,LOC102791911 non-coding upstream 229353 15060004 ~ 15060834 (+)
G227970 NA non-coding upstream 232709 15054705 ~ 15057478 (+)
G227950 NA non-coding upstream 494083 14793781 ~ 14796104 (+)
G228119 NA non-coding downstream 240623 15531131 ~ 15531439 (+)
G228128 cntn1 non-coding downstream 386847 15677355 ~ 15680269 (+)
G228130 NA non-coding downstream 389865 15680373 ~ 15681491 (+)
G228136 NA non-coding downstream 399400 15689908 ~ 15699902 (+)
LOC120553205 NA non-coding downstream 431016 15721524 ~ 15722242 (+)
LOC120553256 gsap,LOC102790605 other upstream 87146 15168604 ~ 15203041 (+)
LOC120553353 spam1,LOC103370765,LOC102199515,LOC101470336,LOC102310263 other upstream 827713 14454593 ~ 14462474 (+)
LOC120553485 tmem60,LOC101486292,LOC104924613,LOC103382814,LOC100699021 other upstream 1285282 14002132 ~ 14004905 (+)
trnal-caa_22 NA other upstream 1487984 13802093 ~ 13802203 (+)
trnal-caa_21 NA other upstream 1488427 13801648 ~ 13801760 (+)
lrrc17 LOC103355197,LOC103382847 other downstream 10014 15300522 ~ 15331178 (+)
prickle1b prickle1 other downstream 151477 15441985 ~ 15471887 (+)
yaf2 yaf2,LOC102236902 other downstream 204169 15494677 ~ 15511178 (+)
tmem168a LOC103368481 other downstream 976628 16267136 ~ 16280061 (+)
cald1a LOC102212027,LOC102781594,LOC102298269,LOC103382882,LOC106941466,LOC103156466,LOC101472471,LOC106916645,LOC106525550,LOC107395349,LOC103356441 other downstream 1480550 16771058 ~ 16831243 (+)

Expression


Co-expression Network