G228236


Basic Information

Item Value
gene id G228236
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 16266339 ~ 16266550 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU309662
gttgctacaaagctaataaagactatcagctccacacaactctctctgtatttctcagtatgactatgttcagaagattgtggcgtccggtgactttcccagATAGAtgattacctcttctgaagagtccaagCGATAGGCTTACTTTAAGTTCCCTTCTGTCATTCATCTCCGTGTGGCTTTTCATCAGCTGAAGAACAGGATTTTTTTCC

Function

GO: NA

KEGG:

id description
ko04977 Vitamin digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU309662 True 212 lncRNA 0.42 1 16266339 16266550

Neighbor

gene id symbol gene type direction distance location
gpr85 gpr85,LOC106576049 coding upstream 45754 16216041 ~ 16220585 (+)
LOC120553010 NA coding upstream 52462 16213082 ~ 16213877 (+)
ppp1r3aa NA coding upstream 90178 16163395 ~ 16176161 (+)
tfec tfec coding upstream 413495 15824344 ~ 15852844 (+)
LOC120553449 LOC102291490,LOC101477496,LOC100701114,LOC102193524 coding upstream 476728 15776915 ~ 15789611 (+)
dock4b NA coding downstream 92242 16358792 ~ 16473673 (+)
tnnt2e NA coding downstream 567114 16833664 ~ 16854874 (+)
LOC120553739 ascl4,LOC103372058 coding downstream 713456 16980006 ~ 16980757 (+)
cdkn1d NA coding downstream 734395 17000945 ~ 17005314 (+)
LOC120553296 LOC103372063 coding downstream 755342 17021892 ~ 17032722 (+)
G228172 NA non-coding upstream 188339 16015731 ~ 16078000 (+)
G228171 NA non-coding upstream 360675 15905061 ~ 15905664 (+)
G228164 NA non-coding upstream 471532 15792841 ~ 15794807 (+)
LOC120553205 NA non-coding upstream 544097 15721524 ~ 15722242 (+)
G228136 NA non-coding upstream 566437 15689908 ~ 15699902 (+)
G228246 NA non-coding downstream 55568 16322118 ~ 16324557 (+)
LOC120553146 NA non-coding downstream 210647 16477197 ~ 16761161 (+)
G228275 NA non-coding downstream 299115 16565665 ~ 16566138 (+)
G228276 NA non-coding downstream 345952 16612502 ~ 16612705 (+)
G228272 NA non-coding downstream 565054 16831604 ~ 16832121 (+)
yaf2 yaf2,LOC102236902 other upstream 755161 15494677 ~ 15511178 (+)
prickle1b prickle1 other upstream 794452 15441985 ~ 15471887 (+)
lrrc17 LOC103355197,LOC103382847 other upstream 935161 15300522 ~ 15331178 (+)
LOC120553256 gsap,LOC102790605 other upstream 1063298 15168604 ~ 15203041 (+)
LOC120553353 spam1,LOC103370765,LOC102199515,LOC101470336,LOC102310263 other upstream 1803865 14454593 ~ 14462474 (+)
tmem168a LOC103368481 other downstream 586 16267136 ~ 16280061 (+)
cald1a LOC102212027,LOC102781594,LOC102298269,LOC103382882,LOC106941466,LOC103156466,LOC101472471,LOC106916645,LOC106525550,LOC107395349,LOC103356441 other downstream 504508 16771058 ~ 16831243 (+)
stmp1 NA other downstream 599760 16866310 ~ 16867796 (+)
morn2 morn2 other downstream 613726 16880276 ~ 16916928 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other downstream 653113 16919663 ~ 16922823 (+)

Expression


Co-expression Network