G228272


Basic Information

Item Value
gene id G228272
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 16831604 ~ 16832121 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU309723
CATAAAACATTCATAACAACACATACTAATATAAATATTGATATCCCTGAGAATGTGAACAGAATTttgacacactcactctctcactcactcactctcacacacacacacaccatcagatcctatgtttttgtattgtccGTCTCATTCATCAGTCTAATTGCTGAAGGAACCAAAGACTTGCTAAACCTGGctgttcttattttattttgcagaaTCCTACCATTGCCCCGATAGCTCCTTAGTTGGAACCTATTGTGCAGAGGGTGAGCAGGGTCACGTAGAATCTGCTCCGCCTTACTCACAATAAGGTCCATACACAGCTGAGCAGCTGACATCTGGTCACACCACTCCCAATGACCCATCTCGCCATACTGACCATGCCTATTCTGGTCTAGGCTGCACATGTTTCCAAACTCGCAAATCAGACCAAAGGACAGGATACTCTGAAGGACAGCCTTGTAAAACAGTTGCAACATATATTGATCCACATTAAAAATGAACAGTTTACGTAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU309723 True 518 lncRNA 0.42 1 16831604 16832121

Neighbor

gene id symbol gene type direction distance location
dock4b NA coding upstream 357931 16358792 ~ 16473673 (+)
gpr85 gpr85,LOC106576049 coding upstream 611019 16216041 ~ 16220585 (+)
LOC120553010 NA coding upstream 617727 16213082 ~ 16213877 (+)
ppp1r3aa NA coding upstream 655443 16163395 ~ 16176161 (+)
tfec tfec coding upstream 978760 15824344 ~ 15852844 (+)
tnnt2e NA coding downstream 1543 16833664 ~ 16854874 (+)
LOC120553739 ascl4,LOC103372058 coding downstream 147885 16980006 ~ 16980757 (+)
cdkn1d NA coding downstream 168824 17000945 ~ 17005314 (+)
LOC120553296 LOC103372063 coding downstream 189771 17021892 ~ 17032722 (+)
wnt7ba wnt7b,LOC106575957 coding downstream 356065 17188186 ~ 17196857 (+)
LOC120553146 NA non-coding upstream 70443 16477197 ~ 16761161 (+)
G228276 NA non-coding upstream 218899 16612502 ~ 16612705 (+)
G228275 NA non-coding upstream 265466 16565665 ~ 16566138 (+)
G228246 NA non-coding upstream 507047 16322118 ~ 16324557 (+)
G228236 NA non-coding upstream 565054 16266339 ~ 16266550 (+)
G228328 strip2 non-coding downstream 50717 16882838 ~ 16887563 (+)
G228326 LOC106583082,LOC106565661 non-coding downstream 84879 16917000 ~ 16919571 (+)
G228353 NA non-coding downstream 175681 17007802 ~ 17010730 (+)
G228354 NA non-coding downstream 181560 17013681 ~ 17014664 (+)
G228355 NA non-coding downstream 182957 17015078 ~ 17015306 (+)
cald1a LOC102212027,LOC102781594,LOC102298269,LOC103382882,LOC106941466,LOC103156466,LOC101472471,LOC106916645,LOC106525550,LOC107395349,LOC103356441 other upstream 361 16771058 ~ 16831243 (+)
tmem168a LOC103368481 other upstream 551543 16267136 ~ 16280061 (+)
yaf2 yaf2,LOC102236902 other upstream 1320426 15494677 ~ 15511178 (+)
prickle1b prickle1 other upstream 1359717 15441985 ~ 15471887 (+)
lrrc17 LOC103355197,LOC103382847 other upstream 1500426 15300522 ~ 15331178 (+)
stmp1 NA other downstream 34189 16866310 ~ 16867796 (+)
morn2 morn2 other downstream 48155 16880276 ~ 16916928 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other downstream 87542 16919663 ~ 16922823 (+)
srr srr,LOC105936311,LOC103459528 other downstream 1698015 18530136 ~ 18533114 (+)
LOC120553630 muc19 other downstream 1990711 18822832 ~ 18855314 (+)

Expression


Co-expression Network