stmp1


Basic Information

Item Value
gene id stmp1
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 16866310 ~ 16867796 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU309770
CGTATACTACTGTTGATGACGGACCGTGACGGACTAGCTTCGTTAGCCAAGTAGATTGGTTGATTTCCTCGTTCTAACCTTTATCTTATCTACTGTCTGACTTTTAAGTCAGTAAGTCAATCTGCTGTTGCCAACCATTCGTTATTCCACCATGCTACAGTTCCTGGCCGGCTTTACCTTGGGAAATGTTGTGGGGATGTATCTGGCTCAAAACTATGagGTTCCCAACATAGCCAAGAAAATCGAAGCCTTTAAGAAAGACGTGGAGGCCAAAAAGAAGCCCCCAGAGTGAGCGAACTGGGACCATGTCACAAGCATGAACAGATGCCCTCTGAAGaaactatttattttacagtGTTATGGTACAATGAGTGTACATTTGATAAATGGACTGATATGGTAAAATATGTATGAGAATATCAACAGTGCCTGGAACCGTATTTGTTTCTTTCCATAGTTTTATAGGCATGTTCTCATcgtagcctatttttataagaTAAATTGTGCAAAGACTGGATTTAAAGAATGTTACGACTAACTAATGGGATCACTTTAAAGTCCAGTATCACATCACTGTTTGCTGTCCTTTTCTCAGATGTACTGGGGTGTTTTAACCTACAGCTGTTTATCTTCACATTAAGTGCATATAATGTTCTCTAAAGTGAATATTAACAGAGCATGCAATTGCTCTCTTCTGTTGTATTCTATAAGCTTCCAGTGTATCAATAATTGCCAAATTTTGACATTCGTGCAAACAATTCTGAATCATTCAGCTTACAATAAAGTTGC
>XM_039791738.1
TACTACTGTTGATGACGGACCGTGACGGACTAGCTTCGTTAGCCAAGTAGATTGGTTGATTTCCTCGTTCTAACCTTTATCTTATCTACTGTCTGACTTTTAAGTCAGTAAGTCAATCTGCTGTTGCCAACCATTCGTTATTCCACCATGCTACAGTTCCTGGCCGGCTTTACCTTGGGAAATGTTGTGGGGATGTATCTGGCTCAAAACTATGagGTTCCCAACATAGCCAAGAAAATCGAAGCCTTTAAGAAAGACGTGGAGGCCAAAAAGAAGCCCCCAGAGTGAGCGAACTGGGACCATGTCACAAGCATGAACAGATGCCCTCTGAAGaaactatttattttacagtGTTATGGTACAATGAGTGTACATTTGATAAATGGACTGATATGGTAAAATATGTATGAGAATATCAACAGTGCCTGGAACCGTATTTGTTTCTTTCCATAGTTTTATAGGCATGTTCTCATcgtagcctatttttataagaTAAATTGTGCAAAGACTGGATTTAAAGAATGTTACGACTAACTAATGGGATCACTTTAAAGTCCAGTATCACATCACTGTTTGCTGTCCTTTTCTCAGATGTACTGGGGTGTTTTAACCTACAGCTGTTTATCTTCACATTAAGTGCATATAATGTTCTCTAAAGTGAATATTAACAGAGCATGCAATTGCTCTCTTCTGTTGTATTCTATAAGCTTCCAGTGTATCAATAATTGCCAAATTTTGACATTCGTGCAAACAATTCTGAATCATTCAGCTTACAATAAAGTTGCTGTTTATGACTTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU309770 False 789 lncRNA 0.39 3 16866310 16867780
XM_039791738.1 True 801 mRNA 0.38 3 16866314 16867796

Neighbor

gene id symbol gene type direction distance location
tnnt2e NA coding upstream 11436 16833664 ~ 16854874 (+)
dock4b NA coding upstream 392637 16358792 ~ 16473673 (+)
gpr85 gpr85,LOC106576049 coding upstream 645725 16216041 ~ 16220585 (+)
LOC120553010 NA coding upstream 652433 16213082 ~ 16213877 (+)
ppp1r3aa NA coding upstream 690149 16163395 ~ 16176161 (+)
LOC120553739 ascl4,LOC103372058 coding downstream 112210 16980006 ~ 16980757 (+)
cdkn1d NA coding downstream 133149 17000945 ~ 17005314 (+)
LOC120553296 LOC103372063 coding downstream 154096 17021892 ~ 17032722 (+)
wnt7ba wnt7b,LOC106575957 coding downstream 320390 17188186 ~ 17196857 (+)
LOC120553078 LOC104966316,LOC103366982,LOC104933494 coding downstream 366216 17234012 ~ 17237437 (+)
G228272 NA non-coding upstream 34189 16831604 ~ 16832121 (+)
LOC120553146 NA non-coding upstream 105149 16477197 ~ 16761161 (+)
G228276 NA non-coding upstream 253605 16612502 ~ 16612705 (+)
G228275 NA non-coding upstream 300172 16565665 ~ 16566138 (+)
G228246 NA non-coding upstream 541753 16322118 ~ 16324557 (+)
G228328 strip2 non-coding downstream 15042 16882838 ~ 16887563 (+)
G228326 LOC106583082,LOC106565661 non-coding downstream 49204 16917000 ~ 16919571 (+)
G228353 NA non-coding downstream 140006 17007802 ~ 17010730 (+)
G228354 NA non-coding downstream 145885 17013681 ~ 17014664 (+)
G228355 NA non-coding downstream 147282 17015078 ~ 17015306 (+)
cald1a LOC102212027,LOC102781594,LOC102298269,LOC103382882,LOC106941466,LOC103156466,LOC101472471,LOC106916645,LOC106525550,LOC107395349,LOC103356441 other upstream 35067 16771058 ~ 16831243 (+)
tmem168a LOC103368481 other upstream 586249 16267136 ~ 16280061 (+)
yaf2 yaf2,LOC102236902 other upstream 1355132 15494677 ~ 15511178 (+)
prickle1b prickle1 other upstream 1394423 15441985 ~ 15471887 (+)
lrrc17 LOC103355197,LOC103382847 other upstream 1535132 15300522 ~ 15331178 (+)
morn2 morn2 other downstream 12480 16880276 ~ 16916928 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other downstream 51867 16919663 ~ 16922823 (+)
srr srr,LOC105936311,LOC103459528 other downstream 1662340 18530136 ~ 18533114 (+)
LOC120553630 muc19 other downstream 1955036 18822832 ~ 18855314 (+)
LOC120553164 NA other downstream 2485187 19352983 ~ 19355551 (+)

Expression


Co-expression Network