G228356


Basic Information

Item Value
gene id G228356
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 17017545 ~ 17017992 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU309830
GCTAATTAAAGACAATCctaagaaacaaaaacaaaagccttACAAAGTCAAACTGGACAGGTCACTTGTACCAGTCTAGCCCTCATTTGGGTTTCCAGGTACTCTGAGCACGTGTCTGGTATCACAGGGTCATCTAGGCACTAGCATTTACAATGGTAGCAGGTTTGAGGAAGACATTTAAAATACCCTAAGTTACCTAAAAAAGGTGAGGAGGAAGACAACCAGATGATGATGAGTGTACTGTGACAGGTAGCCACAGCACGGGGGAGGCATCACAGGGGCGGCCGGGGGGAGGTaagaggaggtggaggacgAGATAGGGaggtgggggtggtggtggaTGTCTTCAGGGGGAACAGCAACAGGACAGGGAGCGGGTTCAGTTATAGTGTCCCACTATGCCAGATGAGACAAGCACATCACTAGGGGAACcacaaagaaaagaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU309830 True 448 lncRNA 0.49 1 17017545 17017992

Neighbor

gene id symbol gene type direction distance location
cdkn1d NA coding upstream 12231 17000945 ~ 17005314 (+)
LOC120553739 ascl4,LOC103372058 coding upstream 36788 16980006 ~ 16980757 (+)
tnnt2e NA coding upstream 162671 16833664 ~ 16854874 (+)
dock4b NA coding upstream 543872 16358792 ~ 16473673 (+)
gpr85 gpr85,LOC106576049 coding upstream 796960 16216041 ~ 16220585 (+)
LOC120553296 LOC103372063 coding downstream 3900 17021892 ~ 17032722 (+)
wnt7ba wnt7b,LOC106575957 coding downstream 170194 17188186 ~ 17196857 (+)
LOC120553078 LOC104966316,LOC103366982,LOC104933494 coding downstream 216020 17234012 ~ 17237437 (+)
kdm5a NA coding downstream 219943 17237935 ~ 17260868 (+)
LOC120553077 LOC107383981,LOC106521814 coding downstream 244654 17262646 ~ 17275457 (+)
G228355 NA non-coding upstream 2239 17015078 ~ 17015306 (+)
G228354 NA non-coding upstream 2881 17013681 ~ 17014664 (+)
G228353 NA non-coding upstream 6815 17007802 ~ 17010730 (+)
G228326 LOC106583082,LOC106565661 non-coding upstream 97974 16917000 ~ 16919571 (+)
G228328 strip2 non-coding upstream 129982 16882838 ~ 16887563 (+)
G228374 NA non-coding downstream 91776 17109768 ~ 17112423 (+)
G228375 NA non-coding downstream 95833 17113825 ~ 17115343 (+)
LOC120553376 NA non-coding downstream 101107 17119099 ~ 17120584 (+)
G228384 NA non-coding downstream 119279 17137271 ~ 17138351 (+)
G228392 NA non-coding downstream 169934 17187926 ~ 17205640 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other upstream 94722 16919663 ~ 16922823 (+)
morn2 morn2 other upstream 100617 16880276 ~ 16916928 (+)
stmp1 NA other upstream 149749 16866310 ~ 16867796 (+)
cald1a LOC102212027,LOC102781594,LOC102298269,LOC103382882,LOC106941466,LOC103156466,LOC101472471,LOC106916645,LOC106525550,LOC107395349,LOC103356441 other upstream 186302 16771058 ~ 16831243 (+)
tmem168a LOC103368481 other upstream 737484 16267136 ~ 16280061 (+)
srr srr,LOC105936311,LOC103459528 other downstream 1512144 18530136 ~ 18533114 (+)
LOC120553630 muc19 other downstream 1804840 18822832 ~ 18855314 (+)
LOC120553164 NA other downstream 2334991 19352983 ~ 19355551 (+)
G228784 LOC103359233,LOC104943309,LOC100709697 other downstream 2392498 19410490 ~ 19413704 (+)
LOC120553210 LOC104943308 other downstream 2613945 19631937 ~ 19839382 (+)

Expression


Co-expression Network