G228363


Basic Information

Item Value
gene id G228363
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 16952943 ~ 17007000 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU309837
TAGTTTATATCAAtatcattaatttttttattttgagcacACTATATGAAATCAACAATGAGAAAGGCAACAATGCCCCAACAACCCACCaatatattttctttacaaTTATCAAAAAGGATTTTGATCCCATACAAATACACTTACATGTAGCAAGGGTACATGAACCAGCATTAAATAACAATGACAAATCCCATACAAAGATTATCATACACTCACATGCATATACAAAGTTATAACAAAAAAACCGCTACACTTCAATATAGCTGCGACAGGCGAAGTTTGCTTGGGCACAGTGAGACACTAGCAGATTAATCTTGACATGCATCATTTTAGTTTTCCACCCAACAGACTTGAGGATTACTACCGCCAATTAATGTTAGAAACTGGGTCTAACAATGTGACAACTCTGATTGaaggaaaacatttttaataattacAAATGTCAAGTCATTTCTAATCTGTTTCTCAGTGagtatttgtatgtttttgtctttttaaaaagaTTACCATAAAAAAGTTCTCTTGTCAATGTTTAAAGTAGTGCAAATATGTAGTTCCAGAAACAACACAGTTATATCAAGAAATATGGGGAATTTATAATTATTTCCCTAGACTCAAAATAAGTTAATATACTTTGAAAGTTTTGTCTGTGAAGATAGGTGCACACAAacattgtcacacacacacacacgcacgcatcaAAAGttggcaaaaaacaacaactttcagATAGCCATATTTGCTATTTTTAGATCTGTGAAATATCGCCTTGTTGAGCCATGAAAGATAACAACATGATTATGAACAACTACTTTCATGCCCATTTTTCGCAGATTGAGGCGTTTGGTTCGtgaaagagagactgagagacttTAAAGGGGACCGACAAAAGCGTGTCTGAATCACAGGCCGCTTGTCTGGGTAGAAAAAGAGACCCTTTGATCCAGAAGGGGTCGGTGACATTTTCTGGTGAGGGTTCCTTTTTATTACAGTTTGTCCCTTTCCCCCACACCACCACCATTTCCTCTGCTCTGTCTATTTATGGGGGAGCAAAGTGAGGCAGCGAGAGAGGGATAGAAAAACAAAAGCTGCCTATACCcccacggcacacacacacacaccccACCCCCCATTTTCCTCTGCTCACTGCTGACACATTGACTCTTTTACCTGATGCGAAACGAGACACCGGTTGAGTGCTGAACCTCGACCGCTTTTACCACAACAAAATAATAAGCCCCccttgtttctgtctctctttcgcCTGCAACCTGAGCTACGttggttttgtttgttgtttttttgcagtgaACTTGTACgtaacttgttttgttttactaAATCACTTGATGAGGTAGTAAGAGTGGATGTATCCAGATTATGGCTTTTTATCCATGTACAAATTAGAATGACTGTAGGTAGGGAGAAAGAAGTCAGCACATCCTATTTGAGTCACCCAAACTGCGTGTTGAGCAGTTGTGGTGTGTTTACACTATATATTTGAAGATCTTCTGACCCGTGACAGAATACTGACCTCGCTCACTGAGTTACTTGTATAAATGATCTGTTTCTAATTTAACAGCACGGCAACTTCTCTTTGGTTCAACTGCCTCAGCTGTTACAACTGTACCTCAAGACAAACACCAAACCAACATAGTCATACACAAACACTTGTTATTATGTACACACTAACATTTATAGAacgacaaagagacaaaaaaaagagaagcagcTCAACTCttcataaagaaaaaaagaaaaaaacgaccAAAAGTGGAACTGAAAGGTTAGGGTTCCTCTGAGCTGCAACATGGGGACAAAACGCTACACTTGCTTCATAGAGAAAATGGGTGTATTTAACAACTCCAAGGTGGACATGAAGACAAAGAGTGGAAGATGTCTACATCATTACAAGCATAAAGCTGACAAAACGAAATAAAGTAATGTTGTAGTCTGTTGCCAAAAAAAGTATAGATTTGTACTTTGTACAGCCCCAATATGCAAATAATGCAAACCAAAAAGGGGATATGATTTGTAGTTTGTACATTTTTCGTTGTGATGgtgttaaatgtatatatatatatggccaaTATTATTAAGTGACAACGGTGGAGCGTATATATGACCCATAATGACTTCTAAACAGCTTATGTTGCCTTGCTTTACACATCCAATTTTTTctaattatctttttttattttttttgacgaTCTAGCATCAcgaatgataaataaataatcacataAGAATAGAAGTCACTGTTGTACAGGTACTGCCACGTTACCTTATTGCTGAACCTCCACCGTTGACCTTTGCCCCGGAACTAATCACAGTCGCGCTGCCACATTTTGAGCCCCGGGTGAGGTTTTGACCCCTGACTTGACTCCTGCTATCAGAGCCCTGGGGCGAGACTAAAGGCTAAGTGTGGTGCAAACCAGGAATAGCAACTCATCTAATCAAAACCATCTCGTGACTTTTAGCAAGAGGGAGAAGAAAGGCCAGAGGACTGACGTCAAATACTAGCCGCAGGCCGCTCAGAAGACAATTAACCTCTTAAAACTGGAGCCCGTTTTCTGTTATTAAGAGTCTGCATTCAAAAATAATTTCACagtatagttaaaaaaaaaaaaaaaatgatgaaaacagtatatagaatatatataatatttatagttAAACAAAAACCGTTCCTAAGGTCTGAGCTTGATTAACTAGGATCATGCTAGCTTCCTTGTGCTGAAAATCTAAGGTATGTGGTGTCAGAGGTGTTTTTGAGCCCATGCTGAATGAGCTGGTGGACAGTCCGTTACAAATtgctacatatatacatatgatATGACACATATCTATGTGAGGTTACGTGTAGAGGGATGTCGACCACTTGGTGGTCCTCCACTGGGTCTACGTTGTGCTTTTCTACTGCAGAGAAGATGCTTTGTAATGCAGAAGCTTCATCTTCTTCACCTTGAAGAA
>TU309840
TAGTTTATATCAAtatcattaatttttttattttgagcacACTATATGAAATCAACAATGAGAAAGGCAACAATGCCCCAACAACCCACCaatatattttctttacaaTTATCAAAAAGGATTTTGATCCCATACAAATACACTTACATGTAGCAAGGGTACATGAACCAGCATTAAATAACAATGACAAATCCCATACAAAGATTATCATACACTCACATGCATATACAAAGTTATAACAAAAAAACCGCTACACTTCAATATAGCTGCGACAGGCGAAGTTTGCTTGGGCACAGTGAGACACTAGCAGATTAATCTTGACATGCATCATTTTAGTTTTCCACCCAACAGACTTGAGGATTACTACCGCCAATTAATGTTAGAAACTGGGTCTAACAATGTGACAACTCTGATTGaaggaaaacatttttaataattacAAATGTCAAGTCATTTCTAATCTGTTTCTCAGTGagtatttgtatgtttttgtctttttaaaaagaTTACCATAAAAAAGTTCTCTTGTCAATGTTTAAAGTAGTGCAAATATGTAGTTCCAGAAACAACACAGTTATATCAAGAAATATGGGGAATTTATAATTATTTCCCTAGACTCAAAATAAGTTAATATACTTTGAAAGTTTTGTCTGTGAAGATAGGTGCACACAAacattgtcacacacacacacacgcacgcatcaAAAGttggcaaaaaacaacaactttcagATAGCCATATTTGCTATTTTTAGATCTGTGAAATATCGCCTTGTTGAGCCATGAAAGATAACAACATGATTATGAACAACTACTTTCATGCCCATTTTTCGCAGATTGAGGCGTTTGGTTCGtgaaagagagactgagagacttTAAAGGGGACCGACAAAAGCGTGTCTGAATCACAGGCCGCTTGTCTGGGTAGAAAAAGAGACCCTTTGATCCAGAAGGGGTCGGTGACATTTTCTGGTGAGGGTTCCTTTTTATTACAGTTTGTCCCTTTCCCCCACACCACCACCATTTCCTCTGCTCTGTCTATTTATGGGGGAGCAAAGTGAGGCAGCGAGAGAGGGATAGAAAAACAAAAGCTGCCTATACCcccacggcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU309837 True 2976 lncRNA 0.38 2 17004002 17007000
TU309840 False 1183 lncRNA 0.38 2 16952943 17007000

Neighbor

gene id symbol gene type direction distance location
strip2 strip2 coding downstream 40314 16882811 ~ 16912629 (-)
dhx57 dhx57 coding downstream 72765 16869736 ~ 16880178 (-)
LOC120553391 NA coding downstream 84270 16867831 ~ 16868673 (-)
LOC120553389 LOC103371308,LOC102780635,LOC101471206 coding downstream 86749 16854992 ~ 16866194 (-)
LOC120553145 lrrn3,LOC103356442 coding downstream 300810 16635871 ~ 16652133 (-)
LOC120553682 NA coding upstream 102537 17109537 ~ 17112443 (-)
cdpf1 cdpf1 coding upstream 107008 17114008 ~ 17116453 (-)
pparaa ppara coding upstream 109753 17116753 ~ 17135130 (-)
atxn10 atxn10 coding upstream 189941 17196941 ~ 17207454 (-)
LOC120553673 NA coding upstream 201626 17208626 ~ 17220357 (-)
G228360 NA non-coding downstream 3137 16914607 ~ 16949806 (-)
G228295 NA non-coding downstream 121704 16824829 ~ 16831239 (-)
G228290 NA non-coding downstream 205903 16746743 ~ 16747040 (-)
G228283 NA non-coding downstream 416650 16536018 ~ 16536293 (-)
G228221 gpr85,LOC106576049 non-coding downstream 728794 16216115 ~ 16224149 (-)
G228401 NA non-coding upstream 130270 17137270 ~ 17138275 (-)
G228423 NA non-coding upstream 214205 17221205 ~ 17222228 (-)
G228439 kdm5a non-coding upstream 236465 17243465 ~ 17243980 (-)
G228474 NA non-coding upstream 265948 17272948 ~ 17275477 (-)
LOC120552976 NA non-coding upstream 395248 17402248 ~ 17402832 (-)
G228291 LOC103356441,LOC102298269,LOC102212027 other downstream 129511 16748842 ~ 16823432 (-)
G228191 NA other downstream 1161090 15771238 ~ 15791853 (-)
znf800b znf800,LOC103364713,LOC103355189,LOC108412280 other downstream 1862960 15055475 ~ 15089983 (-)
grm8a grm8 other downstream 1899658 14634110 ~ 15053285 (-)
waslb LOC103370764 other downstream 2502354 14424237 ~ 14450589 (-)
slc37a3 slc37a3 other upstream 724 17007724 ~ 17020735 (-)
G228465 NA other upstream 288122 17295122 ~ 17302198 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other upstream 823616 17830616 ~ 18100995 (-)
gramd4a gramd4,LOC103376144 other upstream 1356259 18363259 ~ 18421407 (-)
LOC120553633 slc2a13,LOC103369283 other upstream 1731396 18738396 ~ 18823090 (-)

Expression


Co-expression Network