G228423


Basic Information

Item Value
gene id G228423
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 17221205 ~ 17222228 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU309917
tatagataaaAGGGGTTCTGCTTTACTAAATAGACTTGTATAGTAGCGGTCATGCTGTAGATGCACAACGAAAGGAGTAAATaagcgtttttgttttttttgctggacAGAGGTTAACATTTTACCGTAACTGAAAGTTATTTTCTTTGTCGGCGACACTGAAAAGCACACTTAAAATCGTCTTTGTCGATAGGATCATTTATGAGTTGTCATcatcaaaataagaaaaaaaaacttgtttggTTAGTAATGCATGCAAGATGTCTTAAATAGCCATTtggctcataaaaaaaaatcatgttttattgcaatagtattttttatttgattagtaTTGTATTAATGCTTTGTATCTAACATATAGGGCCATTGTATATAGAAAGACctgacattttaaaagattaTGCTGCTCGGTTGTATGAGAATGAAAATGAATTGCCACTATTGTGGCTTCATTTCTGTGTTGCCAGTTTGAGGCCTCTTATCCCCCAAATCCcagcaatgttttattataacggcagtctggttgtttttgttttttttatACTTTTATCAGTCTGAGATAACGCAGAGACATGATTATCATTAtatcattatatattatatgtttctCATCATCAGCCCATGACAACAGTGTGTTCTCCATATTGTGTCCTTGTACTTCTGCAGCatgattcattttttattattattattattattttttttacatgagaTTAGGCCTAAACCTTATTGTTTGAGCTGGTTTCCCTTACTGAACGTTTTGAAATTGTGCAAttatcaaaaaaaaacaacatttttgacATAGATTCAATTAACTAAACATGTCTGTATGGCCATCATGTCACTTGAGGTGAAAAGAAGGAATCAAAAACTGACGCTTCATTTTCAATATAGATAATGGTGTCTAATATTATTGCTTTTGTTATTTATTGAGGATACACAGGACCTGCTAATGAACTCTGCAAAAAATGTTGAACATGAAACCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU309917 True 991 lncRNA 0.32 2 17221205 17222228

Neighbor

gene id symbol gene type direction distance location
LOC120553673 NA coding downstream 848 17208626 ~ 17220357 (-)
atxn10 atxn10 coding downstream 13751 17196941 ~ 17207454 (-)
pparaa ppara coding downstream 86075 17116753 ~ 17135130 (-)
cdpf1 cdpf1 coding downstream 104752 17114008 ~ 17116453 (-)
LOC120553682 NA coding downstream 108762 17109537 ~ 17112443 (-)
trim24 LOC103366983 coding upstream 106 17222334 ~ 17234693 (-)
LOC120553454 LOC104933464,LOC108241015,LOC102202158 coding upstream 83995 17306223 ~ 17331378 (-)
creld2 creld2 coding upstream 343343 17565571 ~ 17570648 (-)
zbed4 zbed4,LOC102794369 coding upstream 353910 17576138 ~ 17583883 (-)
tbc1d22a tbc1d22a,LOC106927306,LOC103356476 coding upstream 911856 18134084 ~ 18270751 (-)
G228401 NA non-coding downstream 82930 17137270 ~ 17138275 (-)
G228363 NA non-coding downstream 214205 16952943 ~ 17007000 (-)
G228360 NA non-coding downstream 271399 16914607 ~ 16949806 (-)
G228295 NA non-coding downstream 389966 16824829 ~ 16831239 (-)
G228290 NA non-coding downstream 474165 16746743 ~ 16747040 (-)
G228439 kdm5a non-coding upstream 21237 17243465 ~ 17243980 (-)
G228474 NA non-coding upstream 50720 17272948 ~ 17275477 (-)
LOC120552976 NA non-coding upstream 180020 17402248 ~ 17402832 (-)
G228522 NA non-coding upstream 295435 17517663 ~ 17600185 (-)
LOC120553191 NA non-coding upstream 1082357 18304585 ~ 18346997 (-)
slc37a3 slc37a3 other downstream 200470 17007724 ~ 17020735 (-)
G228291 LOC103356441,LOC102298269,LOC102212027 other downstream 397773 16748842 ~ 16823432 (-)
G228191 NA other downstream 1429352 15771238 ~ 15791853 (-)
znf800b znf800,LOC103364713,LOC103355189,LOC108412280 other downstream 2131222 15055475 ~ 15089983 (-)
grm8a grm8 other downstream 2167920 14634110 ~ 15053285 (-)
G228465 NA other upstream 72894 17295122 ~ 17302198 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other upstream 608388 17830616 ~ 18100995 (-)
gramd4a gramd4,LOC103376144 other upstream 1141031 18363259 ~ 18421407 (-)
LOC120553633 slc2a13,LOC103369283 other upstream 1516168 18738396 ~ 18823090 (-)
sox5 sox5 other upstream 1806381 19028609 ~ 19270336 (-)

Expression


Co-expression Network