G228474


Basic Information

Item Value
gene id G228474
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 17272948 ~ 17275477 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU309981
caagATAACATGAATTTTtgcatgtttatttaaaaacatactTACAAGTTTCTTTGTACAGTTGCATAATGTTACAGTTCAAAATATGAAACTACGTTTGTACATTGTATATGTCATGTTAGTTCTACGACTTTTGCAGTGGTACAGTATTATAACTTTCACTGATATTATATCCTTTCACTACAAGGTCTAGTCATGTGaaatacaacatttttatttcttgtcaatacaaaagaaaactttCCCCAATCAGTTTATGATAATACAATAGATGATACAAATGTGGCAAAGTAGCCATGAAGTGACGTCAGATACACATGATACTTTAGTTTAAAAAGTAACATACCACAACATACATGTAGCGGTAACAAATGGTTAACCTGTTCCATACTGATTTTGCTGTCTTAGTGTTACATTTGCACAAACGTCATCCTTATTATGCAAACTATAAGATTTATTATTAAACTTTTAGTGTAACCTGTATGTTAGTCTCTACAATTAACACCCTtgaatgagattttttttaaatgccattaACCTCTATTATAACATTGTAACATTTTCAACAACAAGGCTGACTAGTAGATTTCAGCTGACCCTGAATCACTTCATTTACATCATCTGTGAAATGCAGAGCTGAACAGCATATGACAATGTATTAATAGATGTCAGATTAAGTAGCGTAAATAACTTGTATCCCTGAAAAAAATACCTTTGTTCCCTCTAAAGCTTCTAAGTAATCCAATAgatgactttttattttctttatcctTCTTTTATCACATTGCTGCCATCCCTGAAATTTACAGGCACTGCCAAACATACTGTAGTCCTATTATCTCCTGAGTCCTCCCATATTCTGTTATGCATTTAAGTAGACAATGTGACATCTTGTATCTTTCCCTGCAGTGTCTTTAGGATGAAGGCAATGGTGCAGCGAGTCAAGGATGGAAAACCCACATGTCTTTCCCATCCCCACTGGGGCCTCATAAGTTGGAGTCTGTCTCTAAGACAGGTAAGTAGCCATTTCTAGCCATGGAAACGTCTCCCTCAGGAGCAAAGatggccagtaacctttcctGCTCCCTCTTGGTTTTGGGTAAGGTGTCAGATGGTGTGATAAGCAACTGGATGCGCTCTCTGAAAGTCCCTTGGGTGGTGCTGATCTTGTACACCATCCAAAGCGGAATACAGACCATGGAGGAAAGAGCGAGCAGCCAGCCAATGACATAGCCCCACCACGGGTACACATACTCATTGTTGTACTTTAGAGGGGTATATTTGATGAGAGAGAAGGCAAAGGTACCAATGCATGTGGCTGGGGTGAAGAACAACCAACAGTATTTGATGTAAGGTCCTGGGCGGTAGCCGATCATGTCCTCAATGTTATCATAAAAGCGATCTGCACCTGGAAAAACACAGTCAAGACATTTCAATCCACGTTGCGCCTTTAAACAGGACAAATACTCCACAGTATGTTAATTTAGTCACTGGAAAAACTATTTCTCCATTTTCACCAGTGAAATTAAGCCTTTTATGTTTGAGGACAGCTTACCATAGACCCATGCAATGCAGACAGTCTCaaagatggacatgaagagaaGACACATGCCACTGGCTGCGTAGTAATCAAAGAGCTGGAAAACATACATGCCTCCCTACAAATAGAGAGATATAAAGCACTAAGTCAAAGTTACAATTGGAAAACTTACCTGCCACAGTACAATACATTTGTTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU309981 True 1739 lncRNA 0.38 3 17272948 17275477

Neighbor

gene id symbol gene type direction distance location
trim24 LOC103366983 coding downstream 38255 17222334 ~ 17234693 (-)
LOC120553673 NA coding downstream 52591 17208626 ~ 17220357 (-)
atxn10 atxn10 coding downstream 65494 17196941 ~ 17207454 (-)
pparaa ppara coding downstream 137818 17116753 ~ 17135130 (-)
cdpf1 cdpf1 coding downstream 156495 17114008 ~ 17116453 (-)
LOC120553454 LOC104933464,LOC108241015,LOC102202158 coding upstream 30746 17306223 ~ 17331378 (-)
creld2 creld2 coding upstream 290094 17565571 ~ 17570648 (-)
zbed4 zbed4,LOC102794369 coding upstream 300661 17576138 ~ 17583883 (-)
tbc1d22a tbc1d22a,LOC106927306,LOC103356476 coding upstream 858607 18134084 ~ 18270751 (-)
celsr1a NA coding upstream 1153630 18429107 ~ 18523877 (-)
G228439 kdm5a non-coding downstream 28968 17243465 ~ 17243980 (-)
G228423 NA non-coding downstream 50720 17221205 ~ 17222228 (-)
G228401 NA non-coding downstream 134673 17137270 ~ 17138275 (-)
G228363 NA non-coding downstream 265948 16952943 ~ 17007000 (-)
G228360 NA non-coding downstream 323142 16914607 ~ 16949806 (-)
LOC120552976 NA non-coding upstream 126771 17402248 ~ 17402832 (-)
G228522 NA non-coding upstream 242186 17517663 ~ 17600185 (-)
LOC120553191 NA non-coding upstream 1029108 18304585 ~ 18346997 (-)
G228684 NA non-coding upstream 1280576 18556053 ~ 18558509 (-)
G228683 NA non-coding upstream 1283124 18558601 ~ 18559279 (-)
slc37a3 slc37a3 other downstream 252213 17007724 ~ 17020735 (-)
G228291 LOC103356441,LOC102298269,LOC102212027 other downstream 449516 16748842 ~ 16823432 (-)
G228191 NA other downstream 1481095 15771238 ~ 15791853 (-)
znf800b znf800,LOC103364713,LOC103355189,LOC108412280 other downstream 2182965 15055475 ~ 15089983 (-)
grm8a grm8 other downstream 2219663 14634110 ~ 15053285 (-)
G228465 NA other upstream 19645 17295122 ~ 17302198 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other upstream 555139 17830616 ~ 18100995 (-)
gramd4a gramd4,LOC103376144 other upstream 1087782 18363259 ~ 18421407 (-)
LOC120553633 slc2a13,LOC103369283 other upstream 1462919 18738396 ~ 18823090 (-)
sox5 sox5 other upstream 1753132 19028609 ~ 19270336 (-)

Expression


Co-expression Network