G228571


Basic Information

Item Value
gene id G228571
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 18363250 ~ 18368382 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310094
tcaCATTATCCTTTACAATAGACATGTCTTTTAAAAACTCAgtggttttttgttttgttttcttcactGTACATTTCAATAATTTGAATAGAAATACCTCTTTgacaaagaaaaggagaaagtaAACAGAGGAGGTCGACTGTCAcaggtgacaaaaaaaattcctTGTTGTAATGACTGCAGTGTTTACCCCAGGAACACTTGGCCTTTATTTAGCAATTCACTGGCTGAACCTAAAACAGGACTGAATCCTTGAGATTATTTTACTTAGTTAACCTTTTCAATTCTCCCCAGTCATAATGTCAGATTAAGGCTGTGTGCAGCCTTGAGACAACTGATTTGTCTCTGGTACAGCGAGTGCTGTACGCTCACTCGACGTGGATCGCTCGGATGTTGAAAatgcttttgaaaaaaaaaactcaaatcaaCAATTACACAGATGGGAGGAACTACATGTTTAATACAATAGTGAGGACAGCAGCTTAAAACGCAGGGGAACGTTGAGAGGACAACACCACTGTTTTTGACAAGCTCCCCCGGTCACTTATGACGGCAGTTAAATCCTCGAACTGTTCTGTGTTATTTGCCAGTAGCAATTTACCGGTCACAAAATTAAAAAGGAATATTtcgacattttaggaaatatgtTCATAAGCTTTTCCAGTAGTGTCAACTTTATATATGGTCTGAATATTTGGCTGCTGAGCGGTTAGCCGCATAAACAGTTATTGTACAGGCCTCATTCTGTACTCAATTGAATGAAATGGGTTGCTCTCGTCACCTACggctaggattgggcatcgggaaccggttccaacttggaatcatttatataaaaaaaaaaaaatcgtttcGAATACGATCATCGGTTCCAACTAAGCGGCCACTGTACTTCCAGCGttggcttgttgtgttgcagccgtggagcAGAGGCGCGGTGCTCTAAAGCATGGCTTATTTTACCTTGAAAAAGCCCTGTGAACTGTAaaatcaccattgaatcaaaaataTCTtctatctgtgaaataagcatgtgacccgtttcaacgcCGAATCGAACGAATCGTAACAGATAAGAActggaatcgaaaggaagaatgggaattggaatcagaattgttaaaatccaaacgatgcccaaccctacctaCCGCCCTACTGAACTGCAGCCAGACTGAAACACTGCTGAACATCACAGGTTTGTTGTAATGCAAAGAACTATAAATCCACAATATCGTATGTCTAGATAAGGACGGTAATGTTTTAAAGAACAATCTAATGGTGTTCTTCACTGAATACTTATGTTTTCAGTGGCCTTTATCAAACACCATTTCCTATTGCAGGTTTAACAATGTGTGTCAACGTTTTTAGACACTCGTGATTGATCGTTTTACCTCTATGGTAAATagctagcttggctaTGTCCAAAGCTTAGCTAAGCTAAGCGGCTGCTGGCATTAGCTCCTTATTTAgagtacagacatgagagtggtattaaaCTTCTCATCCAATTTCCCAAAATCCCGCACCATTCCTTTGACATTTGCTGGATGCTTTTCTCATAGTGCCTTACAATTATGCGAGTGCtcactttttttttaaaagtatcttCCAGTCCAGATGAATCTCAGGAGGCTCTCTGCCTCAGACTTTAGCCCCCAGTATGGAGGTCTGTAGCTGGGATACAGGCTGCCTAGAGCTCTGTGCTGGCCGGTGGTTTGGTGGTGGTCAAGATCTTCATATATTGGGTAAAGATAGCCTCGAAAGCCTCGTCTCTGTGGATCATGGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310094 True 1790 lncRNA 0.41 3 18363250 18368382

Neighbor

gene id symbol gene type direction distance location
cerk cerk,LOC103356477 coding upstream 49544 18274421 ~ 18313706 (+)
brd1a brd1,LOC101475857 coding upstream 761529 17584577 ~ 17601721 (+)
trnak-cuu_15 NA coding upstream 773087 17590091 ~ 17590163 (+)
alg12 alg12 coding upstream 786823 17570902 ~ 17576427 (+)
pim3 pim3 coding upstream 843733 17514539 ~ 17519517 (+)
alg10 alg10,LOC108244056 coding downstream 167347 18535729 ~ 18539427 (+)
LOC120553631 NA coding downstream 363322 18731704 ~ 18738370 (+)
LOC120553744 LOC103369285 coding downstream 494490 18862872 ~ 18889356 (+)
LOC120553745 NA coding downstream 532233 18900615 ~ 18901342 (+)
LOC120553380 NA coding downstream 533168 18901550 ~ 18911762 (+)
LOC120553790 NA non-coding upstream 563000 17602192 ~ 17800250 (+)
LOC120553531 NA non-coding upstream 1062230 17299723 ~ 17301020 (+)
G228392 NA non-coding upstream 1157610 17187926 ~ 17205640 (+)
G228384 NA non-coding upstream 1224899 17137271 ~ 17138351 (+)
LOC120553376 NA non-coding upstream 1242666 17119099 ~ 17120584 (+)
G228581 NA non-coding downstream 60743 18429125 ~ 18465053 (+)
LOC120553397 NA non-coding downstream 113706 18482088 ~ 18485638 (+)
G228593 NA non-coding downstream 164919 18533301 ~ 18534349 (+)
G228605 NA non-coding downstream 236611 18604993 ~ 18663972 (+)
G228611 LOC102192848,LOC101469293 non-coding downstream 307969 18676351 ~ 18677565 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other upstream 1440427 16919663 ~ 16922823 (+)
morn2 morn2 other upstream 1446322 16880276 ~ 16916928 (+)
stmp1 NA other upstream 1495454 16866310 ~ 16867796 (+)
cald1a LOC102212027,LOC102781594,LOC102298269,LOC103382882,LOC106941466,LOC103156466,LOC101472471,LOC106916645,LOC106525550,LOC107395349,LOC103356441 other upstream 1532007 16771058 ~ 16831243 (+)
tmem168a LOC103368481 other upstream 2083189 16267136 ~ 16280061 (+)
srr srr,LOC105936311,LOC103459528 other downstream 161754 18530136 ~ 18533114 (+)
LOC120553630 muc19 other downstream 454450 18822832 ~ 18855314 (+)
LOC120553164 NA other downstream 984601 19352983 ~ 19355551 (+)
G228784 LOC103359233,LOC104943309,LOC100709697 other downstream 1042108 19410490 ~ 19413704 (+)
LOC120553210 LOC104943308 other downstream 1263555 19631937 ~ 19839382 (+)

Expression


Co-expression Network