G228611 (LOC102192848,LOC101469293)


Basic Information

Item Value
gene id G228611
gene name LOC102192848,LOC101469293
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 18676351 ~ 18677565 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310143
CTGCGCTGGTCTTTCTTCAGAGAGGCGATCTCCCTGTTCCTCCTGCACTCTGTGACTCGGTtcctctcctgctgctccttcATCTGACGCATCAGCGCCACCTTGGTCTTCTTCATCTCGGTCACATCCAGCTGGAGTTTCTTGAGCTGCTTCTCGTACTGCGACTGGTTCTTCAGCAGGCGGGCGTGCTCCTTCTGAGCCGACTGGAGCTTCTGCAGCTCTTTGTTCATGGAGCTCAGCTTCCTCTCGTACTCAACTTTGATCTTCTTGGCCTTCTCCTCCGTGCCTGTCT

Function

NR:

description
PREDICTED: kinesin-like protein KIF21A isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310143 True 292 lncRNA 0.55 2 18676351 18677565

Neighbor

gene id symbol gene type direction distance location
alg10 alg10,LOC108244056 coding upstream 136924 18535729 ~ 18539427 (+)
cerk cerk,LOC103356477 coding upstream 362645 18274421 ~ 18313706 (+)
brd1a brd1,LOC101475857 coding upstream 1074630 17584577 ~ 17601721 (+)
trnak-cuu_15 NA coding upstream 1086188 17590091 ~ 17590163 (+)
alg12 alg12 coding upstream 1099924 17570902 ~ 17576427 (+)
LOC120553631 NA coding downstream 54139 18731704 ~ 18738370 (+)
LOC120553744 LOC103369285 coding downstream 185307 18862872 ~ 18889356 (+)
LOC120553745 NA coding downstream 223050 18900615 ~ 18901342 (+)
LOC120553380 NA coding downstream 223985 18901550 ~ 18911762 (+)
LOC120553378 LOC103374463,LOC104964816 coding downstream 237400 18914965 ~ 18927966 (+)
G228605 NA non-coding upstream 12379 18604993 ~ 18663972 (+)
G228593 NA non-coding upstream 142002 18533301 ~ 18534349 (+)
LOC120553397 NA non-coding upstream 190713 18482088 ~ 18485638 (+)
G228581 NA non-coding upstream 211298 18429125 ~ 18465053 (+)
G228571 NA non-coding upstream 307969 18363250 ~ 18368382 (+)
G228622 NA non-coding downstream 60919 18738484 ~ 18739484 (+)
LOC120553383 NA non-coding downstream 214609 18892174 ~ 18897527 (+)
LOC120553381 NA non-coding downstream 227671 18905236 ~ 18908881 (+)
G228787 NA non-coding downstream 742807 19420372 ~ 19420829 (+)
LOC120553618 NA non-coding downstream 846510 19524075 ~ 19559043 (+)
srr srr,LOC105936311,LOC103459528 other upstream 143237 18530136 ~ 18533114 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other upstream 1753528 16919663 ~ 16922823 (+)
morn2 morn2 other upstream 1759423 16880276 ~ 16916928 (+)
stmp1 NA other upstream 1808555 16866310 ~ 16867796 (+)
cald1a LOC102212027,LOC102781594,LOC102298269,LOC103382882,LOC106941466,LOC103156466,LOC101472471,LOC106916645,LOC106525550,LOC107395349,LOC103356441 other upstream 1845108 16771058 ~ 16831243 (+)
LOC120553630 muc19 other downstream 145267 18822832 ~ 18855314 (+)
LOC120553164 NA other downstream 675418 19352983 ~ 19355551 (+)
G228784 LOC103359233,LOC104943309,LOC100709697 other downstream 732925 19410490 ~ 19413704 (+)
LOC120553210 LOC104943308 other downstream 954372 19631937 ~ 19839382 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other downstream 1175363 19852928 ~ 19905952 (+)

Expression


Co-expression Network