G228683



Basic Information


Item Value
gene id G228683
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 18558601 ~ 18559279 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU310256
AAAAAGTGGGAATGCAGGAACATTTATCGGATCATGAGTGAATCACATTGCAGCACCAACGATGTGAACGTTTTTTTTACGCATCACAGTGATTTTGTTGTATCAACACCCTGAAGTAGTCTTAAAATTATGGCACAAAAATTattagcattattattattttgtatgaATAACTGGGACGCTAATGCCCACCACATCATCGGCTGACTTTCTTACTCTGATGTCTTATACAtagactttttaatgaaatcatGATGTATCCTCAACCCAGCaccatttacacacacaaaaacaaacgtgTCTTTGATATAGAATATATGTGCTGAGTTGCTGCTATTGGCTGCACTAAGGTCTCCACACACTGCGTATGTTTTCAGGTGTTGCCAACAAGAGTTTCTAGATTTTTTTGGCTTAAAGTATTCAACTGATTACAGTCTTTGCTACACTTTTCTACACTCTCTGGCTATTCCCAGCAGTAAAATGTTTCCTTGTGGCCCAAaggtgtgaaaaaaagaaacttgcAACCCAGATGTCTTATAAACACAGTGGAGTGACCGAACATGATTATTTGTAACTGACATTTTCTGCACAATTTGTTTTGAATATCTAACATTGCTGCCTTGTCTAGTTGCTTGATATTCCATAGTTCATCTTTGTTTTCTCACAATCTCCCtcctgt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU310256 True 679 lncRNA 0.37 1 18558601 18559279

Neighbor


gene id symbol gene type direction distance location
tprkb tprkb coding downstream 22959 18533638 ~ 18535642 (-)
trmu trmu,LOC102792203 coding downstream 28509 18524936 ~ 18530092 (-)
celsr1a NA coding downstream 34724 18429107 ~ 18523877 (-)
tbc1d22a tbc1d22a,LOC106927306,LOC103356476 coding downstream 287850 18134084 ~ 18270751 (-)
zbed4 zbed4,LOC102794369 coding downstream 974718 17576138 ~ 17583883 (-)
LOC120553458 cpne8,LOC104935575,LOC103365370,LOC101074159 coding upstream 1817 18561096 ~ 18652690 (-)
LOC120553351 NA coding upstream 107842 18667121 ~ 18705237 (-)
LOC120553632 abcd2 coding upstream 151735 18711014 ~ 18731666 (-)
bcat1 NA coding upstream 738643 19297922 ~ 19309684 (-)
dnai7 NA coding upstream 787039 19346318 ~ 19353491 (-)
G228684 NA non-coding downstream 92 18556053 ~ 18558509 (-)
LOC120553191 NA non-coding downstream 211604 18304585 ~ 18346997 (-)
G228522 NA non-coding downstream 958416 17517663 ~ 17600185 (-)
LOC120552976 NA non-coding downstream 1155769 17402248 ~ 17402832 (-)
G228474 NA non-coding downstream 1283124 17272948 ~ 17275477 (-)
G228713 NA non-coding upstream 321882 18881161 ~ 18884075 (-)
G228731 NA non-coding upstream 334361 18893640 ~ 18975820 (-)
G228759 NA non-coding upstream 455376 19014655 ~ 19022242 (-)
G228824 NA non-coding upstream 767342 19326621 ~ 19328343 (-)
G228826 NA non-coding upstream 773362 19332641 ~ 19336028 (-)
gramd4a gramd4,LOC103376144 other downstream 137194 18363259 ~ 18421407 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other downstream 457606 17830616 ~ 18100995 (-)
G228465 NA other downstream 1256403 17295122 ~ 17302198 (-)
slc37a3 slc37a3 other downstream 1537866 17007724 ~ 17020735 (-)
G228291 LOC103356441,LOC102298269,LOC102212027 other downstream 1735169 16748842 ~ 16823432 (-)
LOC120553633 slc2a13,LOC103369283 other upstream 179117 18738396 ~ 18823090 (-)
sox5 sox5 other upstream 469330 19028609 ~ 19270336 (-)
G228934 fam19a2,LOC103364248 other upstream 1173823 19733102 ~ 19807098 (-)
etv6 etv6 other upstream 1247535 19806814 ~ 19839350 (-)
rerg rerg other upstream 1507616 20066895 ~ 20122393 (-)

Expression



Co-expression Network