LOC120553633 (slc2a13,LOC103369283)


Basic Information

Item Value
gene id LOC120553633
gene name slc2a13,LOC103369283
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 18738396 ~ 18823090 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310292
gtaCATATTTGCATTTCACCTGTGAtggaatgttattttttttactatcaTTTCATGTATTTGATTTGGGTCTTCCTCCATAGCCTTACGTACAAATAGCAGAGCATATCATCTATGTGGTTCTCGTGTCAAAAGTCGAGGAGTAGGCTTTAGCGTAATTTGCCaatgttgttttgtaaaaaaaattgtgaaattgTGTGAGGTTACACCTTGTTAGTCAAATACACATGTGTAATATCTGTGTAGCAAAAAAACTGTTTGAAAGTAGACTACGGAGTAACGTCGTGTAACCAAACCAAACAGGTGAATGAACAGGCCTGCGCTGTCAATGTGTCCAATGAACAGGTGAAGGACAGTCCATCATTTCTGACACGTGGGTCCTAACCCTATCATCATTTAATAAGATATGATacctctttttaataaacttttCAAATAAGAAGCTGTTTATCGAATACCGTGGCACAATGTAATGACATTTCCAGTGCCAGTCAAGTTGAATGAAGTATCTGCAAGTATTGTGATATGTTTGGTATTGTCAAGGTGTCCCCTTTACATATGGACGCTTATGAAAGCAATTAATGAGTAGAACAGGAATTAgtgccattttatttatatatttaagacTAATAAAATGACTTACAGTTTAAAGGTGGGCGAAAGATGGCTGACTAGAATTCAAAATGTGAGGGTATTATTTTATGTTAGATTTGCATCTGGTCCAGGATGtcttacaaaaaaacacacaaactagttttgtacttaaagtattattCCAGTTAAAACGCACACAGATGAAGCTCCATAACAGTGTGTAATTAAACTTGTGTTGACCAAATATTTGGCGTGATTGTTTCAGCTGTTGACATCCAGTTGTGTTAACACTGTCCTCTACCGCCGCGGCGGGGACATTTAATGTGTACTTCTGGTGAAATTCTTTTCTATGTGTGTTTCTACAGTTTATGAGGAACCGCaaaaaataccaataaaaaacaaaaaagtgctGTATAGTATATTTGATTATTGTTCAAGCTGTATATGTTTTGCTAGAGTTTATattctaaataaaaataaatatcttcATGAAATCTTAACACTAGAATATGTATacgggg
>XM_039792263.1
CAAACTGACAGCTAGTCTtgacataaaaaacaacatgttgttttttatgtcaAGACTTAAAAGGCTAGTTATGGCTAAAGTGTCAGCAAGCAGTTGCCTAAAGTTAACtttaagttaacgttagctagctagctacttagctagctacatttaGAAGACTTGGAGGAACATACCTGGAATCCTGTTTTTTTGCCACCAGCAAaagtaagtccaatattcactgtCCATTTCTCACTGGTTTGGTCTTCACAAACTCCAGGGAAATATAGCTAGCTACCTGGGTCTTTTAGCTGGTGGCTTTCGACTTGTTTTCGACTGTTcaccagctagctaacgttaaattgCCATTTGTGCTGGACAtgaaacgttaacgttagcatacagaagatttatcagtttttttgttgctaAAACAGCTTAAAGCTACTGTTACCTGCTGCTGGAAACAAGGTTAATCAGAGCGAATCTGGCCAGTAGTTGTCAAGTGTAAGACGGATCGACAGAATGACTGACGCACATCACCACCCTTGGGCCCTGGTACTCAGCTGGAGTCACAAGGTCGACCATGACTACAATCTCCGTAGTATGAGCAACCTGATGGGCGAGCGGTGGAAGAAAGTGAGCGACGGAGGAGAGCGGAGTCTGATCAAGGCTCCGTCCAGCGCCAGCCTCAGCAGCCAGGGCGCCTCCGCCGCGACCTCCACCGCAGGTGCGCCAGCAGCACCCACCACTTCCACCGGGGACCTGGAGAGGGCTGCCCGCAAGCAGTTCCAGCAGGATGTCACGCCCGGCTTCGTCTACGTCCTGGCCGCGTTCTCCGCCCTGGGGGGCTTCTTGTTCGGCTACGACACCGGGGTGATCTCCGGGGCGATGCTCCTGCTGAAGAGGGAGCTGGACCTGAGCGCTCTGTGGCAAGAGCTGCTCATTTCAAGTACTGTGGCCGCGGCCGCCCTGTCTGCCCTGCTGGGCGGCTTCCTCAACGGGCTCTTCGGGCGCAGAGTTTGCATACTGCTGgccagcttcttcttctccgtcGGTGGGATCGTGTTGAGCACCGCCCCTGGCAAAGAGGTTCTCCTGGCGGGGAGGCTCATCGTCGGAGTCGGGCTTGGTATTGCCTCTATGACGGTGCCAGTGTACATCGCCGAGGCCTCTCCGCCCCACCTCAGGGGTCAGCTGGTGACGGTTAACACCCTCTTCATCACCGGCGGGCAGTTCACCGCCAGCCTCGTCGACGGCGCCTTCAGCTACCTGCAGCGCGATGGGTGGAGGTACATGTTGGGTCTGTCGGTGCTTCCCGCCGTGCTCCAGTTTGTGGGATTCCTGTTCCTGCCGGAGAGCCCTCGCTGGTTAATCCAGCATGGGCTGACCCAGAAGGCCCGCCGCGTGCTCAGTCAGATCCGAGGAAACCAGAACATCGACGAGGAGTACGACAGCATCAAGAACAGCATCGACGAGGAGGACAGCGGAGGAGATGGCCCTGTGATCTGGCGAATGCTGACCTACCCCCCCACTCGGCGAGCCCTCCTGGTTGGCTGTGGTCTTCAGATGTTCCAGCAACTTTCAGGAATCAACACGGTCATGTACTACAGCGCCACCATCCTGCAGATGTCAGGAGTGCGGGACGACAGGCTGGCCATCTGGCTGGCTGGACTCACCACCCTCACCAACTTCCTGTTCACCCTGCTGGGAGTGTGGCTGGTGGAGAGAGTGGGGCGCAGGAAGCTCACCTTGGGCAGCATCATAGGTACATGTTTGAGTTTGAGTCTGCTGGCCATCGGTTTTCTGATGTCCGCCCAGCACAGTCCTCCTGTCACCTTCCACCCTTTAGACCCATCTATGGCCAACTCTACCTGCTCCAAATACCAGCTGTGTGAGCCATGCATGCTGGACCCTGGATGTGGTTTCTGTTACCGTGAGAACAGCTCAGCGCTCCTCGCCTCCTCCTGTGTGCCAGTCAATAAGGCCTCCACCGAGCAAGCAGCATGGGGCAGATGCTCCAACTCCAGCCTGGTGAGAGATGAGACCTACTGGGCCTACAACTACTGTCCCACCTCCTACTCCTGGCTGGTTCTACTGGGTCTGGTCTGCTACCTGGCTGCTTTCGCTCCAGGGATGGGTCCGATGCCGTGGACCATCAACTCTGAGATCTACCCGCTGTGGGCGAGGGGCACCGGGAACGCCTGCGCAGCCGGAGTCAACTGGACCTTCAACGTCCTGGTGTCTCTCACCTTCCTCCACCTGGCTCAGTACTTCACCTACTATGGAGCTTTCTTCCTCTACTCCAGCATGGCTTTGCTGGGTTTCTTCTTCATCTACGGCTGCCTGCCGGAGACCAAAGCCCGGCGTCTGGAGGAGATCGAAGCGCTGTTCGAAAACCAGCTCTGTTCCTGCGGCGCCTCCGATTCGGACGAGGGACGGCAGGTCGAATACATCCGAGTCAAAGGTTCTAACTACCATCTCTCGGACAACGACGCGTCCGACGTGGACTAGAGAGAGGTTTTCCGTTAGCTTCTGTGATTACTGAAACAGTGCAGAGTGTCGCGtggtatttttctttctttttttgtgcgtgcgcgtgtgagCCGAGGAGCCGCTGCTTACCCTCGCTATGAGGTTCAGAATCCCAGCTTGCTTGTATCATTAAGTCGAGCGAGGTTCACTTCCAATTCAGGAATCCAAAAATCACCGACAAGTCGAGGACATGTCAGCCTATTCTCTGAATTGAGGGTGAACCGATGCCAAATCTGGAGTCAAACCTGCTTTAGTAGACCGCTGCGTCTTCAACCACGCACCACAAATATCTCAATTACGAAAGGCTAAAACATTGCCTTTTTTCACACATAacagtagtgttttttttttcgtgaACACTtggacaggaaacacacactgCATGTACAAAATACAAGGGGCATTTTCCTCTCTCACGAAGTCCACCGATGGTGATGTACGTTCCAAAAGAGGCCCCAGCTCAGTATCAGACTCATATACTGAGCTGGGGCCTCTTTTGTATTAGGAACATATTACTGCTACTATCAGTAATATGTTCCTAatattttgtacatttgttgactaaatatattttatgatttatttaccATGTTGTACGTACAGTATACAAAGTAAAAAGTGATCCAGCCATCCTACAGCATTGTGTCAGAAGATGTGTCCATTTAAAGATACAGTAAAGATGGTCTTGAAAACCAGGTTTGTGCGCCCACAAAACCTTTGTTGACATGACAGCAGTTGTGACTTCTTGTCGACCTGTAGTACCATTATGCCTTTCTATATGAAACACATCTCAGTTACATGTTGTTGAAGCTTGTAGCATAGCACACTCATGTCAGTTCCTCATCTGATGACAGTCTTCGTTTGTGGTTCTGATGTCTTTTTATGAAAAGCAAACACCAGAGATGTAcagtatttattgttttaagtttagaaaacaAAACGTGAATTGTCAGTTGGTGCCTAAACAAAACTCACCAAACTCACCAATCTAGTAGCACTGAAAGGAATAAAAGTTCTGTTGCTATAGTTtatatttattaatgtattcatttaaatATGTGTTGCCACAAAGTACTAATTGCTTCAGCctgaaactttaaaaaaactacaTAGACTatctatgtttttatttttattttttaagtttcagGCCTGCAATTCTTTTGCATACCTGCCTCTAAAAATAGCCGTTTTTAACATTCGATTATACTATGGCGAGTACAGCCTCATGTCACTCTGTTACTAGgttgccaaaaaaaacaatatgagCCCATGTTATCAACCTGGGTATTAAACGTGTAATGTCCACTACCTAAAACCATGGTTTTATGACTGAGActtgtatttgaagtatttcattctAGCCTAAACATGATTATATTAGTGCCTGTGTATTGTGAAGGTCCCTTATGGCCGTTTTTCAGTCCAAATCCCTGAAGTGGATGTTTTACTGTATATCATGTTAGATAATTAAGTCagcattgcttttttttattatatatatatatatatatattttattttttttgacatgtaCATATTTGCATTTCACCTGTGAtggaatgttattttttttactatcaTTTCATGTATTTGATTTGGGTCTTCCTCCATAGCCTTACGTACAAATAGCAGAGCATATCATCTATGTGGTTCTCGTGTCAAAAGTCGAGGAGTAGGCTTTAGCGTAATTTGCCaatgttgttttgtaaaaaaaattgtgaaattgTGTGAGGTTACACCTTGTTAGTCAAATACACATGTGTAATATCTGTGTAGCAAAAAAACTGTTTGAAAGTAGACTACGGAGTAACGTCGTGTAACCAAACCAAACAGGTGAATGAACAGGCCTGCGCTGTCAATGTGTCCAATGAACAGGTGAAGGACAGTCCATCATTTCTGACACGTGGGTCCTAACCCTATCATCATTTAATAAGATATGATacctctttttaataaacttttCAAATAAGAAGCTGTTTATCGAATACCGTGGCACAATGTAATGACATTTCCAGTGCCAGTCAAGTTGAATGAAGTATCTGCAAGTATTGTGATATGTTTGGTATTGTCAAGGTGTCCCCTTTACATATGGACGCTTATGAAAGCAATTAATGAGTAGAACAGGAATTAgtgccattttatttatatatttaagacTAATAAAATGACTTACAGTTTAAAGGTGGGCGAAAGATGGCTGACTAGAATTCAAAATGTGAGGGTATTATTTTATGTTAGATTTGCATCTGGTCCAGGATGtcttacaaaaaaacacacaaactagttttgtacttaaagtattattCCAGTTAAAACGCACACAGATGAAGCTCCATAACAGTGTGTAATTAAACTTGTGTTGACCAAATATTTGGCGTGATTGTTTCAGCTGTTGACATCCAGTTGTGTTAACACTGTCCTCTACCGCCGCGGCGGGGACATTTAATGTGTACTTCTGGTGAAATTCTTTTCTATGTGTGTTTCTACAGTTTATGAGGAACCGCaaaaaataccaataaaaaacaaaaaagtg

Function

symbol description
slc2a13 Enables ATPase binding activity; myo-inositol:proton symporter activity; and protease binding activity. Involved in myo-inositol transport and positive regulation of amyloid-beta formation. Is integral component of plasma membrane. Part of cell body; cell periphery; and cell projection.

NR:

description
PREDICTED: proton myo-inositol cotransporter-like

GO: NA

KEGG:

id description
K08150 SLC2A13, ITR; MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13

RNA

RNA id representative length rna type GC content exon number start site end site
TU310292 False 1115 lncRNA 0.35 1 18738396 18739510
XM_039792263.1 True 5050 mRNA 0.46 13 18738508 18823090

Neighbor

gene id symbol gene type direction distance location
LOC120553632 abcd2 coding downstream 6730 18711014 ~ 18731666 (-)
LOC120553351 NA coding downstream 33159 18667121 ~ 18705237 (-)
LOC120553458 cpne8,LOC104935575,LOC103365370,LOC101074159 coding downstream 85706 18561096 ~ 18652690 (-)
tprkb tprkb coding downstream 202754 18533638 ~ 18535642 (-)
trmu trmu,LOC102792203 coding downstream 208304 18524936 ~ 18530092 (-)
bcat1 NA coding upstream 474832 19297922 ~ 19309684 (-)
dnai7 NA coding upstream 523228 19346318 ~ 19353491 (-)
slc5a8 slc5a8 coding upstream 532782 19355872 ~ 19362110 (-)
arl1 arl1 coding upstream 573766 19396856 ~ 19407358 (-)
LOC120553005 NA coding upstream 595151 19418241 ~ 19428429 (-)
G228683 NA non-coding downstream 179117 18558601 ~ 18559279 (-)
G228684 NA non-coding downstream 179887 18556053 ~ 18558509 (-)
LOC120553191 NA non-coding downstream 391399 18304585 ~ 18346997 (-)
G228522 NA non-coding downstream 1138211 17517663 ~ 17600185 (-)
LOC120552976 NA non-coding downstream 1335564 17402248 ~ 17402832 (-)
G228713 NA non-coding upstream 58071 18881161 ~ 18884075 (-)
G228731 NA non-coding upstream 70550 18893640 ~ 18975820 (-)
G228759 NA non-coding upstream 191565 19014655 ~ 19022242 (-)
G228824 NA non-coding upstream 503531 19326621 ~ 19328343 (-)
G228826 NA non-coding upstream 509551 19332641 ~ 19336028 (-)
gramd4a gramd4,LOC103376144 other downstream 316989 18363259 ~ 18421407 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other downstream 637401 17830616 ~ 18100995 (-)
G228465 NA other downstream 1436198 17295122 ~ 17302198 (-)
slc37a3 slc37a3 other downstream 1717661 17007724 ~ 17020735 (-)
G228291 LOC103356441,LOC102298269,LOC102212027 other downstream 1914964 16748842 ~ 16823432 (-)
sox5 sox5 other upstream 205519 19028609 ~ 19270336 (-)
G228934 fam19a2,LOC103364248 other upstream 910012 19733102 ~ 19807098 (-)
etv6 etv6 other upstream 983724 19806814 ~ 19839350 (-)
rerg rerg other upstream 1243805 20066895 ~ 20122393 (-)
cdk17 LOC104930593 other upstream 1478002 20301092 ~ 20354627 (-)

Expression


Co-expression Network