G228731


Basic Information

Item Value
gene id G228731
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 18893640 ~ 18975820 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310334
TAAGGGTAAATAGACTTTATTTCTCAAAGCATGTTTACAGTATTGAAaatgtcatttgtttatttcaacTCTTACCCCAGGAAATAATTCACTTTAATGCaacttttagaaaaaaaaaagaaaaaaaaaaaagaacttccTCTATGTACATTCATTGACATTTGAAAACAAGCAAGGATATTATTAAATGTGATTACTGTACATATAAACATATGCTAAAGTGGCCAGAGAAATTTTAGGACAGACTTTTGTACAATGTTAAATAGTAGTGGAGGTTCATATTATTAGCAGTACTACGATGGCCTATGTATAATGTACAGTGGAAATGCATTCATTTCAGATGGATGGGGAAATAAAGCATATAGGAAATATTTCAGCAGTATTTATAAAATTTGAACCATTCTGATTACGTGGCAGTCAAATTAGACAAGTGCATTCAATTTTGCGCATTGTGTAAATGTAGTCTGATAGTTACTACTAACCCAACAGACAACATTCTTTCTCATTCCTCCAACTCAAGTCAAACCAGTAACTTATCAAAATCCTTTACCACCAAatataaacatacattttaaattcatATTAGGCCCGACATAAACTACTTCTGAATTCTTCCATCTTAATTTAACAGCATGAAAAACACAAcactaaaataaagaaaataatatgCCTAACCTTCAAACTTCAAACCCGTAATTTCAAAACAAGAGCTTTCACAGGCACACCGGCAGAGGAGTGTGAACATAAGACATGGACCAGTCTCGTCAGTAATGGCTCTTCACGGAGCTTTGCAAACTTGTTGCAAGTGAGAATACCTGGGCAAACATGCGATTTGCAAACTGTTTTGGAGTAAACAAGAAAACGTGTTTCACCATATTTTACATGTAACGCTCATGTTTAAATTGCTCGGGAAAAATCAGGTGCTCTCCTGGCACTTTAAATTTTGTAATTCTTTCTTAAAAAATATGCTATATTTGCCCCCAATAATAATCTGCTACTGCATTAGCAAACATCTACACACTCTCAAAGACCTCACCCTCAACAAGTATAAAAAGTCTATAATAGTTATCCTAATTCTCTTTTTTGCTACATGGAAAATGATACAGTGTGCATTATGTACAAGCAAAAAACAGATGTCAGCACTTTGGTGTAGGCTTGTTAAAGTAACCAAGAGATTaacttgttttagttttttaaaaagGGCCTCCTAAAGCTCATTTAAAAACCAtgaacattttaacatgaaGGTCAAAGGTGAATAACAAGAACAGTCACCgacagcagacatttttttttttctccaacagATGGTGCTCTTGCTCCTCAGGTCCCACCAACAGATGACTTTCATTACaatgttttttaacaaaacagtATGTATGTAAGCAACCAACTCCAATTCTTTCAACAATGGgcacttaaaaatgtgcatacCAATAATGGCTCAGCAATCCGACAGTCATCAAGGCCGTATATCACACTTGTCCTAATACACACACGGGAGTGAAAACTGGtctaaaagtgtaaaaaaaaaaaaaaaacttacttcATGAGGAGTGAACAGCAGTGTTCTGTAATATTAGAGACGATTCCCAAACCTTCCCTGACACGGAGCAGACAATATAATTGTTTGGTCTCGTTTAGTACAGCATGCCTTTCGGTCAATGTCACAGTGAATAACGTCCCCTGCACTGCTAACTTACCATGTGAACTACAACCAAATTTCCTATCTAGCATTATGAACATGGAATGTTCAAATTACAGTGAGATGCAAGAGTGTCCCCAGTCAAAACTTCGACAAAAGCCAAGTGTCAAAACATGAAACGCACATTACAGTGAAAATCTCCCTCGAGTCAAAAGACCGCTCACTGATATACAGTACAACTATTGATGCTCTCCTACAACTCAACGTTTCTACCGTCAGTCCAGAAAGTCAAAACACACAAGTCCTTACCAAACTACACAGCACAATGACTGCACAGCTATTCTGGTGCACCACCCATGCGCGGTATGCCGATGGAAATGAGGGTGAAAACAAGCGAGTCACGAGGCAGGCcacaagtttgttttttgtttcgtTTTTGAGTAACTTATCTCACATGGGATTCAGGGACAGCGCTGGCCTTTCCATGttggaatttttttttgtttttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310334 True 2162 lncRNA 0.36 2 18893640 18975820

Neighbor

gene id symbol gene type direction distance location
LOC120553632 abcd2 coding downstream 161974 18711014 ~ 18731666 (-)
LOC120553351 NA coding downstream 188403 18667121 ~ 18705237 (-)
LOC120553458 cpne8,LOC104935575,LOC103365370,LOC101074159 coding downstream 240950 18561096 ~ 18652690 (-)
tprkb tprkb coding downstream 357998 18533638 ~ 18535642 (-)
trmu trmu,LOC102792203 coding downstream 363548 18524936 ~ 18530092 (-)
bcat1 NA coding upstream 322102 19297922 ~ 19309684 (-)
dnai7 NA coding upstream 370498 19346318 ~ 19353491 (-)
slc5a8 slc5a8 coding upstream 380052 19355872 ~ 19362110 (-)
arl1 arl1 coding upstream 421036 19396856 ~ 19407358 (-)
LOC120553005 NA coding upstream 442421 19418241 ~ 19428429 (-)
G228713 NA non-coding downstream 9565 18881161 ~ 18884075 (-)
G228683 NA non-coding downstream 334361 18558601 ~ 18559279 (-)
G228684 NA non-coding downstream 335131 18556053 ~ 18558509 (-)
LOC120553191 NA non-coding downstream 546643 18304585 ~ 18346997 (-)
G228522 NA non-coding downstream 1293455 17517663 ~ 17600185 (-)
G228759 NA non-coding upstream 38835 19014655 ~ 19022242 (-)
G228824 NA non-coding upstream 350801 19326621 ~ 19328343 (-)
G228826 NA non-coding upstream 356821 19332641 ~ 19336028 (-)
G228834 NA non-coding upstream 387352 19363172 ~ 19363381 (-)
G228835 NA non-coding upstream 388336 19364156 ~ 19364416 (-)
LOC120553633 slc2a13,LOC103369283 other downstream 70550 18738396 ~ 18823090 (-)
gramd4a gramd4,LOC103376144 other downstream 472233 18363259 ~ 18421407 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other downstream 792645 17830616 ~ 18100995 (-)
G228465 NA other downstream 1591442 17295122 ~ 17302198 (-)
slc37a3 slc37a3 other downstream 1872905 17007724 ~ 17020735 (-)
sox5 sox5 other upstream 52789 19028609 ~ 19270336 (-)
G228934 fam19a2,LOC103364248 other upstream 757282 19733102 ~ 19807098 (-)
etv6 etv6 other upstream 830994 19806814 ~ 19839350 (-)
rerg rerg other upstream 1091075 20066895 ~ 20122393 (-)
cdk17 LOC104930593 other upstream 1325272 20301092 ~ 20354627 (-)

Expression


Co-expression Network