G228759


Basic Information

Item Value
gene id G228759
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 19014655 ~ 19022242 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310370
GGATAATGACCATGACAGCTGATATTAATAAGCTTCTCAGGCAGGGCTGGTGTACCAAGTTCAAAGGAAGCAATGCCATGGACAGGTCACTGCGTGCTCACTGGGTGGTCATTAATTAAGCTGTGAATTGagggggagaaagaaaagagagaaaaaacaggAAATAGCGAAAGCATGAAGACGAGGCCGCACGGAGAGAAACAAACATGGAGAGGGAGGCATGAAGGAAGAGGAGGTAGGCGGATGTGTGTTGACAGTTGGTATGTCCGCCACTCTTTGGGTCATTAAGAAAAAGATACCCCCGCTACCCATAACCCCCTCCCTGGGAAGTTGATCTAGAAGCTGCAGGGGAGCTTGAACCGGGACCAAGACTCATCATCACCCAGGCCTGTCCACCAAACGCCACCAGGGTGAGGGCGAGCTGGGATACGGAGCCTCCGAATGCCCCTCGAAGCTCCACAAGGATgactggggggagggggggggggagtgtttAATTTAACTACGTGATTTTGTGCGCAAATAAAAAAAGCAGCCCCATGGCTATGGGGCCTCTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310370 True 559 lncRNA 0.52 2 19014655 19022242

Neighbor

gene id symbol gene type direction distance location
LOC120553632 abcd2 coding downstream 282989 18711014 ~ 18731666 (-)
LOC120553351 NA coding downstream 309418 18667121 ~ 18705237 (-)
LOC120553458 cpne8,LOC104935575,LOC103365370,LOC101074159 coding downstream 361965 18561096 ~ 18652690 (-)
tprkb tprkb coding downstream 479013 18533638 ~ 18535642 (-)
trmu trmu,LOC102792203 coding downstream 484563 18524936 ~ 18530092 (-)
bcat1 NA coding upstream 275680 19297922 ~ 19309684 (-)
dnai7 NA coding upstream 324076 19346318 ~ 19353491 (-)
slc5a8 slc5a8 coding upstream 333630 19355872 ~ 19362110 (-)
arl1 arl1 coding upstream 374614 19396856 ~ 19407358 (-)
LOC120553005 NA coding upstream 395999 19418241 ~ 19428429 (-)
G228731 NA non-coding downstream 38835 18893640 ~ 18975820 (-)
G228713 NA non-coding downstream 130580 18881161 ~ 18884075 (-)
G228683 NA non-coding downstream 455376 18558601 ~ 18559279 (-)
G228684 NA non-coding downstream 456146 18556053 ~ 18558509 (-)
LOC120553191 NA non-coding downstream 667658 18304585 ~ 18346997 (-)
G228824 NA non-coding upstream 304379 19326621 ~ 19328343 (-)
G228826 NA non-coding upstream 310399 19332641 ~ 19336028 (-)
G228834 NA non-coding upstream 340930 19363172 ~ 19363381 (-)
G228835 NA non-coding upstream 341914 19364156 ~ 19364416 (-)
G228836 NA non-coding upstream 342882 19365124 ~ 19365528 (-)
LOC120553633 slc2a13,LOC103369283 other downstream 191565 18738396 ~ 18823090 (-)
gramd4a gramd4,LOC103376144 other downstream 593248 18363259 ~ 18421407 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other downstream 913660 17830616 ~ 18100995 (-)
G228465 NA other downstream 1712457 17295122 ~ 17302198 (-)
slc37a3 slc37a3 other downstream 1993920 17007724 ~ 17020735 (-)
sox5 sox5 other upstream 6367 19028609 ~ 19270336 (-)
G228934 fam19a2,LOC103364248 other upstream 710860 19733102 ~ 19807098 (-)
etv6 etv6 other upstream 784572 19806814 ~ 19839350 (-)
rerg rerg other upstream 1044653 20066895 ~ 20122393 (-)
cdk17 LOC104930593 other upstream 1278850 20301092 ~ 20354627 (-)

Expression


Co-expression Network