G228784 (LOC103359233,LOC104943309,LOC100709697)


Basic Information

Item Value
gene id G228784
gene name LOC103359233,LOC104943309,LOC100709697
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 19410490 ~ 19413704 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310402
AGGAAACATGCTGGAGTGGTGTCTGCCCAAAGACATGGACCTGGAGGGAGTGGAGTTCAAAGCCATCGCCAGCGGCTCCCACCGAGTTACCACAGACTTCATCTACTTTCGGAAGGGCTGCTACTTTGGCCTGGCCTGCTTTGCCAACATGGCGGTGGAGAGCACAGTGGAGAGGGGCGCGAGGATGAAGTCGGTAGGGATCCTGTCTCCTTCCTACACCTTGCTCTACCGCTACATGAGCTTCCTGGAGCACCAGGTCAGGCTCCAGCTTCAGTCCCCAGGCCACTACTCTCCCCTGGAGGCCTTCTATGAGGACAAGAGAGCACTTCTGCCCCCCGGTGGTGACGGTGTTGTTATTGCATGTCCAGCCAATGCCTGGGGAGCCGCAATCAACCACAGCATGCACCCTGAAATGAAGATCACTCACCCTGCAGGCTGCATGTCCCAGTTCATCCGCTTCTTTGGGGAGCAGATCATGGTGCTGTGGAAACTGGCTCTCCTCCGCAGACGCATCCTCATCTTCTCCCCTCCACCTGTGGGCGTGGTC

Function

NR:

description
PREDICTED: protein LCHN-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310402 True 547 TUCP 0.58 4 19410490 19413704

Neighbor

gene id symbol gene type direction distance location
utp20 utp20 coding upstream 13684 19364203 ~ 19396806 (+)
LOC120553161 NA coding upstream 64210 19311505 ~ 19346280 (+)
etnk1 etnk1,LOC104964819 coding upstream 435850 18961085 ~ 18974640 (+)
pyroxd1 NA coding upstream 450642 18951283 ~ 18959848 (+)
LOC120553379 iapp,LOC103371156 coding upstream 461975 18946158 ~ 18948515 (+)
mapk11 mapk11,LOC100700904,LOC103382962 coding downstream 41120 19454824 ~ 19470973 (+)
trnaq-uug_5 NA coding downstream 45379 19459083 ~ 19459154 (+)
LOC120553798 LOC104924523,LOC103359230,LOC104954154,LOC103382963,LOC106531213 coding downstream 59446 19473150 ~ 19479275 (+)
LOC120553799 NA coding downstream 65213 19478917 ~ 19483152 (+)
LOC120553398 NA coding downstream 73898 19487602 ~ 19495323 (+)
LOC120553381 NA non-coding upstream 501609 18905236 ~ 18908881 (+)
LOC120553383 NA non-coding upstream 512963 18892174 ~ 18897527 (+)
G228622 NA non-coding upstream 671006 18738484 ~ 18739484 (+)
G228611 LOC102192848,LOC101469293 non-coding upstream 732925 18676351 ~ 18677565 (+)
G228605 NA non-coding upstream 746518 18604993 ~ 18663972 (+)
G228787 NA non-coding downstream 6668 19420372 ~ 19420829 (+)
LOC120553618 NA non-coding downstream 110371 19524075 ~ 19559043 (+)
LOC120553213 NA non-coding downstream 302558 19716262 ~ 19717346 (+)
G228905 NA non-coding downstream 395971 19809675 ~ 19810580 (+)
LOC120553215 NA non-coding downstream 420303 19834007 ~ 19841662 (+)
LOC120553164 NA other upstream 54939 19352983 ~ 19355551 (+)
LOC120553630 muc19 other upstream 555176 18822832 ~ 18855314 (+)
srr srr,LOC105936311,LOC103459528 other upstream 877376 18530136 ~ 18533114 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other upstream 2487667 16919663 ~ 16922823 (+)
morn2 morn2 other upstream 2493562 16880276 ~ 16916928 (+)
LOC120553210 LOC104943308 other downstream 218233 19631937 ~ 19839382 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other downstream 439224 19852928 ~ 19905952 (+)
G228924 NA other downstream 568544 19982248 ~ 19985648 (+)
LOC120553749 NA other downstream 733374 20147078 ~ 20173407 (+)
LOC120553418 NA other downstream 777224 20190928 ~ 20225185 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000013_03885988_03895027 KIAA1147 coding CI01000013 null 3885988 ~ 3895027 (+)