G228880


Basic Information

Item Value
gene id G228880
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 19499238 ~ 19499610 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310527
aataaaggttaaataaaaaGATCTCACTGTATTCCAGGTAAAAAGTTTAGCGCAGAAGCAGCGTTACTATGgatcccacgcaacttctaggcatgtcccgccctacgaagcagcccgattggttggggttaggcattgacctcgagtagTTAAAGTTAGGATAGCCGACTGGTCAGgagataggacctgaacaaatcgggttccattaccttgcgtaagcatggacgcctggccaatagtagcgtgtggatgctattgaagggcgggtccctcctagaagttgcgtgggttccataataacgtgTAGAAGCAGG

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU310527 True 314 lncRNA 0.48 2 19499238 19499610

Neighbor

gene id symbol gene type direction distance location
trnal-cag_24 NA coding downstream 46210 19452946 ~ 19453028 (-)
trnal-cag_23 NA coding downstream 46688 19452469 ~ 19452550 (-)
trnal-cag_22 NA coding downstream 47165 19451988 ~ 19452073 (-)
trnal-cag_21 NA coding downstream 51092 19448064 ~ 19448146 (-)
trnal-cag_20 NA coding downstream 52135 19447021 ~ 19447103 (-)
lrig3 lrig3 coding upstream 47016 19546626 ~ 19569057 (-)
LOC120553212 fam19a2,LOC103364248 coding upstream 233456 19733066 ~ 19806755 (-)
LOC120553419 timp3,LOC103152565 coding upstream 483869 19983479 ~ 20000522 (-)
cep83 cep83 coding upstream 760415 20260025 ~ 20272144 (-)
hcfc2 hcfc2 coding upstream 772916 20272526 ~ 20286587 (-)
G228871 NA non-coding downstream 16085 19482867 ~ 19483153 (-)
G228870 NA non-coding downstream 16621 19482172 ~ 19482617 (-)
G228869 LOC104924522 non-coding downstream 17761 19481224 ~ 19481477 (-)
G228851 NA non-coding downstream 18154 19480821 ~ 19481084 (-)
G228855 NA non-coding downstream 84636 19414330 ~ 19414602 (-)
G228881 atp23,LOC106609469 non-coding upstream 7073 19506683 ~ 19507560 (-)
G228882 NA non-coding upstream 14493 19514103 ~ 19514434 (-)
G228885 NA non-coding upstream 51007 19550617 ~ 19569359 (-)
LOC120553214 NA non-coding upstream 217612 19717222 ~ 19718412 (-)
G228946 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC106945279 non-coding upstream 353354 19852964 ~ 19905943 (-)
sox5 sox5 other downstream 228902 19028609 ~ 19270336 (-)
LOC120553633 slc2a13,LOC103369283 other downstream 676148 18738396 ~ 18823090 (-)
gramd4a gramd4,LOC103376144 other downstream 1077831 18363259 ~ 18421407 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other downstream 1398243 17830616 ~ 18100995 (-)
G228465 NA other downstream 2197040 17295122 ~ 17302198 (-)
G228934 fam19a2,LOC103364248 other upstream 233492 19733102 ~ 19807098 (-)
etv6 etv6 other upstream 307204 19806814 ~ 19839350 (-)
rerg rerg other upstream 567285 20066895 ~ 20122393 (-)
cdk17 LOC104930593 other upstream 801482 20301092 ~ 20354627 (-)
G229199 NA other upstream 1458047 20957657 ~ 20958220 (-)

Expression


Co-expression Network