G228882


Basic Information

Item Value
gene id G228882
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 19514103 ~ 19514434 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310530
CCACAAATTCACCTCTGAACATACATTGATACTGGATTAATAATTACCCAAGCCCATTAATTCTAGGTTGTGCTCTGCTCTTTTCTCTCCAGGTTCACTCTGTCCAGGTTGGTCTTGTATTCTGTTGTGTCCTGTTACTTCATGTTTGCTGTTATCTCGTTTCATTTCCATTGTTTGTCTCCCCCTCTGTTTGGTTCCATTCCGTCTCTTCTGTTTGCATTTATTTGTTTCAGTTTTCTTGCGTTTGTTACAATTctcttgtctttttctgttgTGTCCTGATTTTCTTTACATATTATTCGCAGCTTTCAATTCACAGAGTTTGACTGAAT

Function

GO:

id name namespace
GO:0005507 copper ion binding molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU310530 True 332 lncRNA 0.38 1 19514103 19514434

Neighbor

gene id symbol gene type direction distance location
rpap3 NA coding downstream 9797 19495419 ~ 19504306 (-)
trnal-cag_24 NA coding downstream 61075 19452946 ~ 19453028 (-)
trnal-cag_23 NA coding downstream 61553 19452469 ~ 19452550 (-)
trnal-cag_22 NA coding downstream 62030 19451988 ~ 19452073 (-)
trnal-cag_21 NA coding downstream 65957 19448064 ~ 19448146 (-)
lrig3 lrig3 coding upstream 32192 19546626 ~ 19569057 (-)
LOC120553212 fam19a2,LOC103364248 coding upstream 218632 19733066 ~ 19806755 (-)
LOC120553419 timp3,LOC103152565 coding upstream 469045 19983479 ~ 20000522 (-)
cep83 cep83 coding upstream 745591 20260025 ~ 20272144 (-)
hcfc2 hcfc2 coding upstream 758092 20272526 ~ 20286587 (-)
G228881 atp23,LOC106609469 non-coding downstream 6543 19506683 ~ 19507560 (-)
G228880 NA non-coding downstream 14493 19499238 ~ 19499610 (-)
G228871 NA non-coding downstream 30950 19482867 ~ 19483153 (-)
G228870 NA non-coding downstream 31486 19482172 ~ 19482617 (-)
G228869 LOC104924522 non-coding downstream 32626 19481224 ~ 19481477 (-)
G228885 NA non-coding upstream 36183 19550617 ~ 19569359 (-)
LOC120553214 NA non-coding upstream 202788 19717222 ~ 19718412 (-)
G228946 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC106945279 non-coding upstream 338530 19852964 ~ 19905943 (-)
G228949 NA non-coding upstream 343669 19858103 ~ 19858863 (-)
G228947 LOC103152567,LOC106913527,LOC106945279,LOC106922717,LOC102300237 non-coding upstream 362663 19877097 ~ 19882079 (-)
sox5 sox5 other downstream 243767 19028609 ~ 19270336 (-)
LOC120553633 slc2a13,LOC103369283 other downstream 691013 18738396 ~ 18823090 (-)
gramd4a gramd4,LOC103376144 other downstream 1092696 18363259 ~ 18421407 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other downstream 1413108 17830616 ~ 18100995 (-)
G228465 NA other downstream 2211905 17295122 ~ 17302198 (-)
G228934 fam19a2,LOC103364248 other upstream 218668 19733102 ~ 19807098 (-)
etv6 etv6 other upstream 292380 19806814 ~ 19839350 (-)
rerg rerg other upstream 552461 20066895 ~ 20122393 (-)
cdk17 LOC104930593 other upstream 786658 20301092 ~ 20354627 (-)
G229199 NA other upstream 1443223 20957657 ~ 20958220 (-)

Expression


Co-expression Network