G228905


Basic Information

Item Value
gene id G228905
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 19809675 ~ 19810580 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310559
CTTGTGATTGCCCCAGAGCCTGGCCAGGCCGTTGGGGTCCATGATGCGGAAGATTTTGGTCTCGGTATCCTCCCAGCGGATGTAGTTCTCGTACCTGCTGTCTGACAGGAGCTGGTAGACGTAGTCCCACAGCAGCCTGCAGTCTGCAAGGACGCGACAGGGAAACACACAGAGTCGTGATAAgttactgctgatgaagacccAACATTCTCCCGTTCTCACTGCTATTAGAATGTGGACACGTGGCTCAGACCACCTCCGAATGTAGTTTTAGTGATCCGATCTCAGTGCGTCCTGAAGAGTGTTTTCAGCTGTAATCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310559 True 322 lncRNA 0.52 2 19809675 19810580

Neighbor

gene id symbol gene type direction distance location
LOC120553510 slc16a7,LOC103364250 coding upstream 181962 19594413 ~ 19627713 (+)
atp23 atp23,LOC102777000,LOC106609469 coding upstream 302084 19504380 ~ 19507591 (+)
LOC120553398 NA coding upstream 314352 19487602 ~ 19495323 (+)
LOC120553799 NA coding upstream 326523 19478917 ~ 19483152 (+)
LOC120553798 LOC104924523,LOC103359230,LOC104954154,LOC103382963,LOC106531213 coding upstream 330400 19473150 ~ 19479275 (+)
LOC120553417 syn3 coding downstream 113191 19923771 ~ 20047996 (+)
LOC120553415 NA coding downstream 314061 20124641 ~ 20162039 (+)
LOC120553750 NA coding downstream 363871 20174451 ~ 20184363 (+)
LOC120553751 NA coding downstream 374502 20185082 ~ 20190908 (+)
plxnc1 NA coding downstream 402207 20212787 ~ 20260428 (+)
LOC120553213 NA non-coding upstream 92329 19716262 ~ 19717346 (+)
LOC120553618 NA non-coding upstream 250632 19524075 ~ 19559043 (+)
G228787 NA non-coding upstream 388846 19420372 ~ 19420829 (+)
LOC120553381 NA non-coding upstream 900794 18905236 ~ 18908881 (+)
LOC120553383 NA non-coding upstream 912148 18892174 ~ 18897527 (+)
LOC120553215 NA non-coding downstream 23427 19834007 ~ 19841662 (+)
G228912 NA non-coding downstream 58813 19869393 ~ 19871723 (+)
G228922 NA non-coding downstream 105535 19916115 ~ 19916317 (+)
LOC120553527 NA non-coding downstream 110520 19921100 ~ 19921854 (+)
G228989 NA non-coding downstream 488154 20298734 ~ 20301441 (+)
G228784 LOC103359233,LOC104943309,LOC100709697 other upstream 395971 19410490 ~ 19413704 (+)
LOC120553164 NA other upstream 454124 19352983 ~ 19355551 (+)
LOC120553630 muc19 other upstream 954361 18822832 ~ 18855314 (+)
srr srr,LOC105936311,LOC103459528 other upstream 1276561 18530136 ~ 18533114 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other upstream 2886852 16919663 ~ 16922823 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other downstream 42348 19852928 ~ 19905952 (+)
G228924 NA other downstream 171668 19982248 ~ 19985648 (+)
LOC120553749 NA other downstream 336498 20147078 ~ 20173407 (+)
LOC120553418 NA other downstream 380348 20190928 ~ 20225185 (+)
ucmaa NA other downstream 571813 20382393 ~ 20391406 (+)

Expression


Co-expression Network