G228922


Basic Information

Item Value
gene id G228922
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 19916115 ~ 19916317 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310591
AAATAACACACATGATGACAGGACAGACCCTTTGCATGTTAGTGGAGGGGATACAGATTATATCAGGTGAAAAACGgcctgatattttgtgtatcccctCTGTAACTTTGGCTAGAAAACAGCACACATATCCATATTGTCTCAGGTTGTTTATTGTGACCTGGTAAAATCAGAAAATAACACACATGATGAGAGGACAGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310591 True 203 lncRNA 0.40 1 19916115 19916317

Neighbor

gene id symbol gene type direction distance location
LOC120553510 slc16a7,LOC103364250 coding upstream 288402 19594413 ~ 19627713 (+)
atp23 atp23,LOC102777000,LOC106609469 coding upstream 408524 19504380 ~ 19507591 (+)
LOC120553398 NA coding upstream 420792 19487602 ~ 19495323 (+)
LOC120553799 NA coding upstream 432963 19478917 ~ 19483152 (+)
LOC120553798 LOC104924523,LOC103359230,LOC104954154,LOC103382963,LOC106531213 coding upstream 436840 19473150 ~ 19479275 (+)
LOC120553417 syn3 coding downstream 7454 19923771 ~ 20047996 (+)
LOC120553415 NA coding downstream 208324 20124641 ~ 20162039 (+)
LOC120553750 NA coding downstream 258134 20174451 ~ 20184363 (+)
LOC120553751 NA coding downstream 268765 20185082 ~ 20190908 (+)
plxnc1 NA coding downstream 296470 20212787 ~ 20260428 (+)
G228912 NA non-coding upstream 44392 19869393 ~ 19871723 (+)
LOC120553215 NA non-coding upstream 74453 19834007 ~ 19841662 (+)
G228905 NA non-coding upstream 105535 19809675 ~ 19810580 (+)
LOC120553213 NA non-coding upstream 198769 19716262 ~ 19717346 (+)
LOC120553618 NA non-coding upstream 357072 19524075 ~ 19559043 (+)
LOC120553527 NA non-coding downstream 4783 19921100 ~ 19921854 (+)
G228989 NA non-coding downstream 382417 20298734 ~ 20301441 (+)
G229058 NA non-coding downstream 523141 20439458 ~ 20448557 (+)
G229060 NA non-coding downstream 526350 20442667 ~ 20454788 (+)
G229108 cdc123,LOC102776001 non-coding downstream 646746 20563063 ~ 20565180 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other upstream 10163 19852928 ~ 19905952 (+)
LOC120553210 LOC104943308 other upstream 76733 19631937 ~ 19839382 (+)
G228784 LOC103359233,LOC104943309,LOC100709697 other upstream 502411 19410490 ~ 19413704 (+)
LOC120553164 NA other upstream 560564 19352983 ~ 19355551 (+)
LOC120553630 muc19 other upstream 1060801 18822832 ~ 18855314 (+)
G228924 NA other downstream 65931 19982248 ~ 19985648 (+)
LOC120553749 NA other downstream 230761 20147078 ~ 20173407 (+)
LOC120553418 NA other downstream 274611 20190928 ~ 20225185 (+)
ucmaa NA other downstream 466076 20382393 ~ 20391406 (+)
LOC120553023 LOC106946322,LOC103151516,LOC104922640 other downstream 1231950 21148267 ~ 21150351 (+)

Expression


Co-expression Network