G228989


Basic Information

Item Value
gene id G228989
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20298734 ~ 20301441 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310674
AAAAAGAGTCACACAAACTGTTCACCGGCAGCTCAGTGTTTCAGAGAGCTCGAATTCACAACACAGCAGGCCTTCCATgcaacgccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactacagtttTACAATGATAAATATTTAGCCGTTGCAGAAATCTCCTTCCGTGCATGTCACTGTACtgttcatgtaaaaaaaaaaaactattagcAACAAAGTTAGCAGTTAACAGTGCAATAATCCTGCATTCTTATGTTTGATTACAGGGACAtgcttaaaaaatgaaaaaggcgGTGTGATAAAGTGTCAGTGAAGCATCCAAACACGCTGATACAGTTCATGtgaaatacaaaatgaaagggAAGAAAAAGGTTTCCTCATTTTAAAGCTACCTAGGGAGAAATCATGAGGCGATGGGTCAATGTAATACAGGATGTCTACCATTaatataatgacttttttcccGTGAACACAAGAAGTGTTCTGTATTTACAATGTAAACCGTTAACACCATCTTCcatctgcttttttttgtgaCAGTTCATGTGGAGCTTTAATTTAGAATTGAATCCACgttgaaagagaaagaaatattCTGCCAAAGGTTTAAACTACTGAAATGAGTATGTTTACAGGATTATTACACTATTAGCTGCAAACTGTGTTAAAGTCCATGTTCATTACATTGATGCTCTCCGCTATTAATGTGTTTTAAGAAGCAGTGGTAGTGCTTCCAGCACTTTCCTAGCATGTTCTACCCAATCAGTAACTCAAGTGTTGCTCAAATCCTTTAAATCTCAACAGACAATGAATGTGAAATCTTCATGTAGATGTTGAGCAAAAGAGCTGCAGTAACGGGAACACCTCCGTCATATCTTGTCTCACACTCTTACATGTTAAACCTTTGATGCTCAATACATTCCTGGAGTTATTCAGTGCAGAAGCTTAAGCACTGCACTCTATTTTTTTTGCTACTGTGAGTGTagaaatctctctctctgcctcttccATGATGGATTTCTCCCCGTGTGActgttaaagctacattgtgtaagaatttctcccatctagtggtgaaattgtatatgacaaccaactgaatgtTACTTTCTAGGCCTTCCTCCTACtgtggccgaacccgaaattggctctctccatcgtttacacgcagctgttctagccactccaatattaactttggtcttgttgcttgtcgtgttgtcattttaattctcttttttgctttcctggcgagtaatctccccctggcattcgtcacggtgccaataggtgtaagagggcgaaatgcggaggtatgtccctctttggttaatgtattttaaaagatggaggcgctacatggctgccgtcattcgagcgactcgctagtatgtattctgaatgattctgaatggcagattctacgcttacgagaatactttgtttagttggtggaagtagttacacatgaatgagcacatatttgtgaaagaacaaagttttttttgctaagaatcaactcaaaaaattacacaatgtaggtttaaattTAGTAGCAAAATGGCAGCTCTTGCGCTCGCAAGTAAGCAAATGAgttcatttcccaaaatgtcaaactattccttttaaagCACTTTTGGGCTTTCACATAGCTGCTGGAAATATCTGGAAAATTAAGACCTCTGTTGGTCCACAGGAATAAGACAAATACTCACTGCAACTAAATTAAACCAGGAATGCAAAGCACACCAGCCGACGCTTCAGAAGTGTTTTCAGTGATTTTCGGGAGATCTTCCAACTGATTTAGTCAACATGCAGTTAAAAGTGAGACTTCTCAACAGGCTTCATCTGTAGCATCACTGTCAGTTGCAAACAACACAGCGGGCAGTTAAATCTAAAATTTCAatttgaaatctttttttttttttttattatcatctTGTGTACAAATGCTGGAGAGAGAAGTGGTCCGACGCCAAGTGGAAAACAACCATTTTGCTTTTTGATCACCCCACCCCGATCCATGCTATCCCACCCCGCCCCTCTGAAAAAACATGCCACAATGACACTGTTGTTCCACAaggagaggtcaaaggtcacagacacagagaacaCATCTTAATACTGTTGGGTAAACTCGGCCGCGTCGAGGCACGGGTCCCTcgttcccaaaaaaaaaacaaaaaaaaacaaaacactgcagTGCAAGTTAAAAACAAAGACCTACTGCAGTGAGATCTCAATGCACACAGAGCGAGAAAGTGTagcttgcatttttttttctttcttttttttttttttaaagcactgaAGTCCTGGCAGTTTTGTGAGGGGTTTTAGGGAAGGCTTGCTGGCTTCCTGTGGGACATCACATAACTTCCTGTTCAGCTCCAGAATTTCTCCTCTTTCGACTGTGCTTTTCGCTCGCCTTTCTGTTTGCCTCCCCCTAACTCCTCAGTTTTGGTCCCATTGCTGAGACAAGAATGGTCCAAAAGAACCAAAAGTTGATTTCATGTTCTCGCAGTTTGATTGGACTCTATGTGTGCTTCTTTAACCCTCAGTTTAAAATGGTTACCACAATCTGCTCACGATCCTGCTTTTTGACCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310674 True 2708 lncRNA 0.41 1 20298734 20301441

Neighbor

gene id symbol gene type direction distance location
elk3 LOC104930592,LOC102779228,LOC102209493,LOC102296588 coding upstream 648 20287264 ~ 20298086 (+)
plxnc1 NA coding upstream 38306 20212787 ~ 20260428 (+)
LOC120553751 NA coding upstream 107826 20185082 ~ 20190908 (+)
LOC120553750 NA coding upstream 114371 20174451 ~ 20184363 (+)
LOC120553415 NA coding upstream 136695 20124641 ~ 20162039 (+)
LOC120553583 phyh coding downstream 54175 20355616 ~ 20362520 (+)
LOC120553582 phyh coding downstream 63362 20364803 ~ 20376348 (+)
ccdc3a ccdc3,LOC102778083 coding downstream 121396 20422837 ~ 20434548 (+)
nudt5 nudt5 coding downstream 264156 20565597 ~ 20570560 (+)
fbxo18 NA coding downstream 269547 20570988 ~ 20603179 (+)
LOC120553527 NA non-coding upstream 376880 19921100 ~ 19921854 (+)
G228922 NA non-coding upstream 382417 19916115 ~ 19916317 (+)
G228912 NA non-coding upstream 427011 19869393 ~ 19871723 (+)
LOC120553215 NA non-coding upstream 457072 19834007 ~ 19841662 (+)
G228905 NA non-coding upstream 488154 19809675 ~ 19810580 (+)
G229058 NA non-coding downstream 138017 20439458 ~ 20448557 (+)
G229060 NA non-coding downstream 141226 20442667 ~ 20454788 (+)
G229108 cdc123,LOC102776001 non-coding downstream 261622 20563063 ~ 20565180 (+)
G229130 NA non-coding downstream 305791 20607232 ~ 20607530 (+)
G229182 NA non-coding downstream 622507 20923948 ~ 20925059 (+)
LOC120553418 NA other upstream 73549 20190928 ~ 20225185 (+)
LOC120553749 NA other upstream 125327 20147078 ~ 20173407 (+)
G228924 NA other upstream 313086 19982248 ~ 19985648 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other upstream 392782 19852928 ~ 19905952 (+)
LOC120553210 LOC104943308 other upstream 459352 19631937 ~ 19839382 (+)
ucmaa NA other downstream 80952 20382393 ~ 20391406 (+)
LOC120553023 LOC106946322,LOC103151516,LOC104922640 other downstream 846826 21148267 ~ 21150351 (+)
arid2 arid2 other downstream 1075431 21376872 ~ 21429238 (+)
G229423 NA other downstream 1536481 21837922 ~ 21847020 (+)
G229425 NA other downstream 1547770 21849211 ~ 21850601 (+)

Expression


Co-expression Network