rerg (rerg)


Basic Information

Item Value
gene id rerg
gene name rerg
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20066895 ~ 20122393 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310704
GGATTCATTCATTCCAGTCAGAGCTGCTGTTCGGTCTGCCCACCCATCCACGCGTCTGTCCACCCAGCTGTTTATATATCCCTCCTTCCATCCAGCTGTGCGCTGCGTCCGGGAACGTCAGACGCTTTATCTTTGATCGGCGGACCTGACAACTTTGTGTTGTTTATTTGTTCATTCTTCTCTTCCTGATCAGCGTTTCATCACCGGGAGATTAGTGCTGCGTTCAGCGGTCGCTGACGCTGCAAGGATGAATGGCTGACCTCGGAGCTCACTGATTGGTTTGCTAATCTTTGCTGGCCGCAGCTGCTGTCATGGCCAAAAGCCCGGAGGTGAAGCTGGCCGTCTTCGGCAGGGCGGGGGTGGGCAAGTCAGCTTTGGTGGTGAGATTTCTGACCAGACGCTTCATCTGGGAGTACGACCCGACACTCGAATCAACATATCGTCATCAAGCCAACATTGACGATGAGGTTGTCACCATGGATATCCTGGACACTGCAGGGCAGGAGGACATCCAGCAGAAGGAGGGGCACATGCGTTGGGGTGACGGATTTGTCATTGTGTACGACATCACAGACCGGGGAAGCTTTGAGGAGGTGGCCCCACTCCGAAGTCTCCTAGAggaggtgaagaaaccgg
>XM_039792445.1
GTCGGCAACTCCAGCAGCTCCGCTCCGTATATTTCCACTGACACTCCGTTTTAGGGATTCATTCATTCCAGTCAGAGCTGCTGTTCGGTCTGCCCACCCATCCACGCGTCTGTCCACCCAGCTGTTTATATATCCCTCCTTCCATCCAGCTGTGCGCTGCGTCCGGGAACGTCAGACGCTTTATCTTTGATCGGCGGACCTGACAACTTTGTGTTGTTTATTTGTTCATTCTTCTCTTCCTGATCAGCGTTTCATCACCGGGAGATTAGTGCTGCGTTCAGCGGTCGCTGACGCTGCAAGGATGAATGGCTGACCTCGGAGCTCACTGATTGGTTTGCTAATCTTTGCTGGCCGCAGCTGCTGTCATGGCCAAAAGCCCGGAGGTGAAGCTGGCCGTCTTCGGCAGGGCGGGGGTGGGCAAGTCAGCTTTGGTGGTGAGATTTCTGACCAGACGCTTCATCTGGGAGTACGACCCGACACTCGAATCAACATATCGTCATCAAGCCAACATTGACGATGAGGTTGTCACCATGGATATCCTGGACACTGCAGGGCAGGAGGACATCCAGCAGAAGGAGGGGCACATGCGTTGGGGTGACGGATTTGTCATTGTGTACGACATCACAGACCGGGGAAGCTTTGAGGAGGTGGCCCCACTCCGAAGTCTCCTAGAggaggtgaagaaaccgtatCGTGCCTTGGTCCCTTTAGTAAATAAGTCCCATCTGGACCAGTCCGCAGGTTGCACAGAATGGAAGCTGGTCCTGTGGGGCAAGAACCCACGAGTGGACAGCGAAGAGGTGGTGGATGCAGGAAGGAAGGTAGCCTGA

Function

symbol description
rerg Orthologous to human RERG (RAS like estrogen regulated growth inhibitor).

NR:

description
PREDICTED: ras-related and estrogen-regulated growth inhibitor

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07855 RERG; Ras-related and estrogen-regulated growth inhibitor

RNA

RNA id representative length rna type GC content exon number start site end site
TU310704 False 636 TUCP 0.55 5 20067036 20122339
XM_039792445.1 True 830 mRNA 0.54 6 20066895 20122393

Neighbor

gene id symbol gene type direction distance location
LOC120553419 timp3,LOC103152565 coding downstream 66373 19983479 ~ 20000522 (-)
LOC120553212 fam19a2,LOC103364248 coding downstream 260140 19733066 ~ 19806755 (-)
lrig3 lrig3 coding downstream 497838 19546626 ~ 19569057 (-)
rpap3 NA coding downstream 562589 19495419 ~ 19504306 (-)
trnal-cag_24 NA coding downstream 613867 19452946 ~ 19453028 (-)
cep83 cep83 coding upstream 137632 20260025 ~ 20272144 (-)
hcfc2 hcfc2 coding upstream 150133 20272526 ~ 20286587 (-)
mcm10 mcm10,LOC102783079 coding upstream 271673 20394066 ~ 20409676 (-)
optn optn coding upstream 287802 20410195 ~ 20430496 (-)
camk1da camk1d coding upstream 333282 20455675 ~ 20530744 (-)
G228946 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC106945279 non-coding downstream 160952 19852964 ~ 19905943 (-)
G228947 LOC103152567,LOC106913527,LOC106945279,LOC106922717,LOC102300237 non-coding downstream 184816 19877097 ~ 19882079 (-)
G228949 NA non-coding downstream 208032 19858103 ~ 19858863 (-)
LOC120553214 NA non-coding downstream 348483 19717222 ~ 19718412 (-)
G228885 NA non-coding downstream 497536 19550617 ~ 19569359 (-)
G229062 NA non-coding upstream 233243 20355636 ~ 20357563 (-)
G229071 NA non-coding upstream 260072 20382465 ~ 20391508 (-)
G229076 ccdc3,LOC102778083 non-coding upstream 311762 20434155 ~ 20437536 (-)
G229079 NA non-coding upstream 319927 20442320 ~ 20450128 (-)
G229095 NA non-coding upstream 412892 20535285 ~ 20535597 (-)
etv6 etv6 other downstream 227545 19806814 ~ 19839350 (-)
G228934 fam19a2,LOC103364248 other downstream 259797 19733102 ~ 19807098 (-)
sox5 sox5 other downstream 796559 19028609 ~ 19270336 (-)
LOC120553633 slc2a13,LOC103369283 other downstream 1243805 18738396 ~ 18823090 (-)
gramd4a gramd4,LOC103376144 other downstream 1645488 18363259 ~ 18421407 (-)
cdk17 LOC104930593 other upstream 178699 20301092 ~ 20354627 (-)
G229199 NA other upstream 835264 20957657 ~ 20958220 (-)
ptprz1b NA other upstream 941298 21063691 ~ 21145533 (-)
slc38a2 slc38a2 other upstream 1338683 21461076 ~ 21474602 (-)
LOC120553090 NA other upstream 1648695 21771088 ~ 21811097 (-)

Expression


Co-expression Network