cdk17 (LOC104930593)


Basic Information

Item Value
gene id cdk17
gene name LOC104930593
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20301092 ~ 20354627 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310720
GTCAAAAAGCAGGATCGTGAGCAGATTGTGGTAACCATTTTAAACTGAGGGTTAAAGAAGCACACATAGAGTCCAATCAAACTGCGAGAACATGAAATCAACTTTTGGTTCTTTTGGACCATTCTTGTCTCAGCAATGGGACCAAAACTGAGGAGTTAGGGGGAGGCAAACAGAAAGGCGAGCGAAAAGCACAGTCGAAAGAGGAGAAATTCTGGAGCTGAACAGGAAGTTATGTGATGTCCCACAGGAAGCCAGCAAGCCTTCCCTAAAACCCCTCACAAAACTGCCAGGACTtcagtgctttaaaaaaaaaaaaaagaaagaaaaaaaaatgcaa
>XM_039791217.1
GCCCCTGTTAAACACAGCGTGGTGATTGATGGCAGCTAGCTCGCACCCCTCCCGTCTCGACAGCAGATCCACCTCCAGCCTCTTTAAACTGCTTTCACCGCCACACAAAACGACATTTTGGGGGTTCGGTCTCAAGCTCTTCGTCCTCACACCCCTCGTATCTCCCCGTGTGTTTCGGAGGATATTTCTTTTCTAACGTAGCGTTTGGAATCGAAACCAAACACAGACGGAGCTGTGTTTTAGGCTACTTCAGTGGGCGGATAAAGCGGAGGAGGGCATCCGGGCCTGGCTGCTCCGGAGAGTTGGCTTGAAACCAGGGAATTCACCATTTTCAGGCCGTGCGCTGCCCTGCTATGGAGAAGATGAAGAGGATTAAGAAGCGCCTGTCGTTAACACTCCGCTCCAGTCAGACCATCGACGAGTCGCTGTCTGAACTGGCCGAGCAGATGACCATCGAGGACGGCGGCACCAAGGACAGTGAGCCCTTCATGAGGAACGGCCGCCCCCCCACCTCCCACAGCATGCACTCCTTCCTGCACCAGTACACCGGCTCCTTCAAGAAGCCTCCGCTCCGCCGGCCGCACAGCGTTATCGGCGGCTCCCTGGGTTCCTTCATGGCAATGCCACGCAACGGTAGTCGTCTTGATATTGTGCACGAGAACCTGAAGATGGGCTCCGATGGGGAGAGCGACCAGGCATCGGGAACGTCTTCAGACGAGGTGCAGTCTCCGACTGGCGTCTGTCTGAGGAACCGCATGCACCGGCGGATCTCCATGGAGgaCCTCAACAAGCGCCTGTCGCTGCCCGCTGACATCCGAATCCCCGACGGTTAcctggagaagctgcagctcaGCAGCCCGCCCTTTGACCAGCCGCTCAGCCGGCGCTCCCGCAGAGCCTCGCTGTCGGAGATTGGTTTTGGCAAGTTGGAGACGTACATTAAGCTGGACAAACTGGGAGAGGGAACCTACGCCACAGTATTTAAAGGACGCAGTAAGCTGACGGACAACCTGGTGGCACTGAAGGAGATCCGGCTGGAGCACGAGGAGGGAGCGCCATGCACCGCCATCAGAGAAGTGTCGTTACTGAAGGACCTCAAACACGCCAACATCGTGACGCTTCACGACATCGTCCACACCGACAAGAGCCTCACGCTCGTCTTCGAGTACCTGGATAAGGACCTGAAGCAGTACATGGATGACTGTGGAAACATAATGAGCATGCACAATGTGAAGGTCTTCCTCTTCCAGATTTTGCGAGGGCTGTCGTATTGTCATAAGAGGAAAGTTCTCCACAGGGACCTGAAGCCCCAGAACCTCCTGATAAATGAGAATGGAGAACTCAAACTGGCTGATTTTGGTCTGGCGAGGGCCAAGTCTGTCCCGACTAAAACCTACTCCAACGAGGTGGTGACTCTTTGGTACCGGCCCCCCGATGTCCTCCTGGGATCCTCTGAGTATTCAACACAGATCGACATGTGggGTGTCGGTTGTATATTCTATGAGATGGCTGCAGGTCGGCCGCTGTTCCCCGGCTCCACCGTGGAGGACGAGCTCCACCTCATCTTCAGGTTACTGGGTACACCCACGGAGGAGAAGTGGCCAGGAATCTCCTCCATTGAAGAATTTAAATCCTACAACTTCCCCAAATACAAACCACAGCCGTTGATCAACCACGCTCCCAGGCTGGACGGCGACGGCATCGAGCTGCTGCTGGCTTTCCTCAGATACGAATCTAAGAAGAGGAATTCAGCTGAAGAGGCTATGAAACATTCCTACTTCAGGCAGCTTGGGACAAGAGTTCAGACGCTGCCCGAGAGTGTATCGATATTCACATTAAAAGAAGTGCAGCTGCAGAGGGACCCTGGCTACAGGAACTCCTACAACCCAGAGTCAGGTAACGGCAAGATCAACAGGAGGCAGAGCATGCTCTTTTAATAAAGAGGATGAAGAGAATGGTGTACTGCCCAGCTTCGTCATCACTTCCCACAAACCTCTCGCATGAGCCCACCTCCCCCTCGGagtgacccccccccctcttacctgcacacacacacacataaacatgcacacacacacacacacacctatctgAGCAAGTGACTCTGGGTTGAATCTATTTGGAGACTGTTTATTTattgggggagggaggggaggttGAATTTTTTTGCTGCTAAACTACTACTGTCTGTATTTAACAcaccgtgtgtgtgcgtgcgcgtgcatgtgtgtgcgtgtgtgtgtgtgtacaagatGTGAACTCGAGACGCCATGCACAGTTGAGCAGTCAGAAAGGTTACCATTGTTTTTCTTCTGACTACGATTCTCCGGCTTCGTTTGAGTTATAATTCCACTGATGTTGATGTCAGCGCTGTGATCCaagttgttgttcttgttgtcGTGCTTGGAGACCGAAcgctttcagtttttttttataaatatgtatatatatatatatatatatttgtaatttatgttttgtttttcttcgaGCTTCCGTGACTGAACTCTACAACATTTCCAGGTTTTGAAAGACTGGGACGCTAGATGGTCTTgatggggtgggggtgggggcggGGGGTATGTTACACTGAGGGTCAAAAAGCAGGATCGTGAGCAGATTGTGGTAACCATTTTAAACTGAGGGTTAAAGAAGCACACATAGAGTCCAATCAAACTGCGAGAACATGAAATCAACTTTTGGTTCTTTTGGACCATTCTTGTCTCAGCAATGGGACCAAAACTGAGGAGTTAGGGGGAGGCAAACAGAAAGGCGAGCGAAAAGCACAGTCGAAAGAGGAGAAATTCTGGAGCTGAACAGGAAGTTATGTGATGTCCCACAGGAAGCCAGCAAGCCTTCCCTAAAACCCCTCACAAAACTGCCAGGACTtcagtgctttaaaaaaaaaaaaaagaaagaaaaaaaaatgcaagctACACTTT

Function

NR:

description
PREDICTED: cyclin-dependent kinase 17

GO: NA

KEGG:

id description
K15595 CDK17, PCTK2; cyclin-dependent kinase 17

RNA

RNA id representative length rna type GC content exon number start site end site
TU310720 False 337 lncRNA 0.42 1 20301102 20301438
XM_039791217.1 True 2942 mRNA 0.52 17 20301092 20354627

Neighbor

gene id symbol gene type direction distance location
hcfc2 hcfc2 coding downstream 14505 20272526 ~ 20286587 (-)
cep83 cep83 coding downstream 28948 20260025 ~ 20272144 (-)
LOC120553419 timp3,LOC103152565 coding downstream 300570 19983479 ~ 20000522 (-)
LOC120553212 fam19a2,LOC103364248 coding downstream 494337 19733066 ~ 19806755 (-)
lrig3 lrig3 coding downstream 732035 19546626 ~ 19569057 (-)
mcm10 mcm10,LOC102783079 coding upstream 39439 20394066 ~ 20409676 (-)
optn optn coding upstream 55568 20410195 ~ 20430496 (-)
camk1da camk1d coding upstream 101048 20455675 ~ 20530744 (-)
LOC120553073 NA coding upstream 182429 20537056 ~ 20544945 (-)
cdc123 cdc123 coding upstream 195407 20550034 ~ 20564985 (-)
G228946 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC106945279 non-coding downstream 395149 19852964 ~ 19905943 (-)
G228947 LOC103152567,LOC106913527,LOC106945279,LOC106922717,LOC102300237 non-coding downstream 419013 19877097 ~ 19882079 (-)
G228949 NA non-coding downstream 442229 19858103 ~ 19858863 (-)
LOC120553214 NA non-coding downstream 582680 19717222 ~ 19718412 (-)
G228885 NA non-coding downstream 731733 19550617 ~ 19569359 (-)
G229062 NA non-coding upstream 1009 20355636 ~ 20357563 (-)
G229071 NA non-coding upstream 27838 20382465 ~ 20391508 (-)
G229076 ccdc3,LOC102778083 non-coding upstream 79528 20434155 ~ 20437536 (-)
G229079 NA non-coding upstream 87693 20442320 ~ 20450128 (-)
G229095 NA non-coding upstream 180658 20535285 ~ 20535597 (-)
rerg rerg other downstream 178699 20066895 ~ 20122393 (-)
etv6 etv6 other downstream 461742 19806814 ~ 19839350 (-)
G228934 fam19a2,LOC103364248 other downstream 493994 19733102 ~ 19807098 (-)
sox5 sox5 other downstream 1030756 19028609 ~ 19270336 (-)
LOC120553633 slc2a13,LOC103369283 other downstream 1478002 18738396 ~ 18823090 (-)
G229199 NA other upstream 603030 20957657 ~ 20958220 (-)
ptprz1b NA other upstream 709064 21063691 ~ 21145533 (-)
slc38a2 slc38a2 other upstream 1106449 21461076 ~ 21474602 (-)
LOC120553090 NA other upstream 1416461 21771088 ~ 21811097 (-)
G229716 NA other upstream 2750133 23104760 ~ 23239573 (-)

Expression


Co-expression Network