G229060


Basic Information

Item Value
gene id G229060
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20442667 ~ 20454788 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310762
AAAAAAAGCAGACTGTATAAAGTTTTAGTCCTACAAACAATTCTCAGAGGCAGAGCTGCTCtcattaaattaaatgtgaaTTTCCCCTTACGGGATAAATAAAGGCAtgtcttcctctccttcttcttctattAATTGAGTTAAATCttgaggtttttaacattagCTAGACCGAAGCACAGCTGCTAGCAAGGCAGCTTTGCACTGGATTACCTAATGCTTACaaccttttgagaaaatgagagACAATGCTATTATTGTGACTCCTAAAGTATTTGGCAACAGTTTACACCGAAACTTTCACAATATAAGTAAACTCACATCTTTGTCTAGTTCACTAGAAGAAGAATTCTGAGCCAACAAAGCAAATATATTAATGTGTAGAATTAAGCATGACATCCACCGCTAACTATGTAGCCTAGAAGTAAAGAAAATAGCCAATAGCTATGGACTTGACTTCCTTGGAAGCAGAGTTAGCAACAGTGCTAGCCTTTGCTCGTTTGGGATAAAATGgtcacaatatatatacacaaagcAATCTAAGTTAGCTACCTAGCTTTCCAAGTAGCCCTACAAGGCTATTGCTAGCTAGGTAAGTTAATGTACATAGCCAATAGGACATAGCCAATAGCTACATATAGCCTACTCGAATTACTTAAAATCAAAGTAAGCAACAGGGCTGGCCTTTGACTTTTTGGAATACATTATATAAGCTATCTAAGTTAGCTACTTAGCCTAGCTGAATTTCCAACTAGCTTTATAAGGCTTTTGCTAACTAGGTAAGTTAAAGCAAAAAATGTAAAGGTCATGAATGAATAAACAACATTCCTTGCCACTTGgtacaatacaaaaaaagtctcaaattattgttaataaaTTATTTTCATGCCATGTCCACATGTTATGCAGGAAATCAGCTGGAAGTCACTCTCATAAGCAGCATTAGAGCAACTTCCATTGGAACATGGTATCCAGCCCTCCTTATTTGAATGTCAGTTAGCTGTGTTGCAATGAGAGATGAGATTATTTCCGCCTATCAAAACTGTTTGTAGAAGTGAAACTCTTCTACTGAGTAAACTCAGCTTTTTGTGGACTTTTACACTCTCAACCTGGGTACATCTTTACATATTACAGAGATACTAACATCATACAAGGGCATATAAGATTACGCAAACACTCATGGTGAAGTTGACTTCTTGaagcacttttttcgacatgcttgTGTTTTCATCTTTTGTGACGGCgtcttcttttaaaaaaaaaaaaaaaaaaaaaggggagtgTGAGCTCAAAGGGGAAAGGGTGGACGAGAGCACCCCTCGTCCTTAACAGTGTGTTTCGGAGTCGGTCACAGCTTTGGATTTCTTCCTTTAGAATGGCAAAAACGTAAGCCTGAGTTCAGTAAACGATGCTTTTAGTTGGACTGACACTGAAGTGGTGGTGGAACACAAATGGCGTTAAACTGCACTGTGTAgctctggatttttttttttgctttttttgttggttttgtttttacattaaacATTCCATAGAGAATACAATCAACTTCCCTCGACACGCTCACTCATTCACTCTCACATGCCTTAACAGCAAaacttttttgtaaatattatCTTGAAAATGATCATTCATATTCACAATCTATTTACAGTCCAGTAGTAGTTTACAGTAGCATCTTTAACATGGGAAGAGTCATAcagaaaacagtttttttttttttttttaacagagcaGCATGAACCTGAACCCTCAGCCTGCCTCACAATACATTCGTAAACCCAAAAGTCCACACTGGAGTGGACCAAATCACATTTGACCAAACATATTCTTACAGTGTTGGCTGTCGATTGGTTAACAGCTTTTGTGCCAGAGAAGAAACCTGGTACACCACTTTTACAATGAAGCTCATTcattaataatagtaataataataatgaatagtTAAGTGATTATAATTGTCTAAGATCTGGCAGGGATTCTGTGTCTTGCAACTATTCCCCCAAACgaagttgctgtttttttttttaaactataggTGCTGATGTTGTTTCCTGATCCCACTTCCAAGAAAAAGCATTGACAACActtacaaatgtttaaaaaaatgcatagCAATCAAATGGGGATGTACACTATACATggttacagtgaataattaGATTAAGGTGATCATTGGAATAAAGCCCTTGCATGGTTAAAAGTTCCCCTCATTGACACATGGATAATTACATGGATTGACTTTAGAGTTAGGTTAGTAGAGACACATGTAACACAAGACCCCACAGTAAAAACGTCAGAatgaatatatatttctgaAAGGTGAACGGTGTAGTGCATGTGGGTGTTGTAAATCAGTAAGAAAACACTGAAGCGTTAGCTTTTCTCTATGACTGCAcatttaaaatcaaataaatcagGCTAACTGGCCTTTTTCTTAcacacctaaccctaacaaaactattGAACATAAACTCTTACTATGACCGGATTAGTTGCTAGGACAACGTGCCTAAAGTAACTGCAATGGTTCGTCTAAAAGCATCAACCGTGTCGGTGCTGTTACCACATCTGCAAGTTTCACACTTTCTGCCTAAGTGCTTGAACAACAACACAGTAGATCTCGGTGTGAGTGTTTGGAGCCCCATACATAGGAACGAGGTGGACAATTCCCGTGTGATTAGAGGTTTCTGACAATTTCGACGACTCACATTCTTTTTTGGTTTAGGAAACAGTGGGAAAGAGCAGAAAATCCAAACACACTGGACTTATCCTTGCAGAGCTTATTGGAGGACGTAGGTGCTGCTGTCAAAAGACTGAGAACACAGAAAAGGAGGGCGAGAGATTTGGACTGGACGGCATCCACAAATGCCTTGTCATGGTTTGTTTTAGTCAACTTCAGTGCCAAATCGGTGGAACTTAATACACACGATGCCGCGGTGAGCCAAAAGTGAATTCCAGAAAGCTTGGGTGAGTGTTGATTTACTGTCATTTGCCTTTTATCCAGCTGTGGTCTCACTTGTTTTTCAGCAGCACTCCGTGTAGCTAATAAAAAGGTAAATGGCAACAGATTAGGAAGGGATCAAAGGTGAATACATTTCTCTCCAAACAAAAATTTGCAGCTAGAGTTCAGCCCTTAGTTGTAGTCCAACTCAAACAGCTTCCTGTCTTGTTCTGTTCTCCCCCAATTCATCGAGTAGAATGAACCAAATTGTCTTTCTACCTAGCACTAGTCTTTGGCTACAATTCACAATAAAGGGATCAGAAGAATTGCATCATGACAATCTGATATGTGTGCGTAGGTAGTCACCCAACATCGTACAGTTCTGCCCTCTGAGTTAATGTCTCTAAAGACGTTACAAGCAGTGACACGATCCAGGCTGCTGCAGTCATGGGTCAGAGTCGTGACAACGTTCCATCAAGAACAAATTCAAACAAAGTCAGTCTGTCATATGGAACTTAGCATTATTAAAAAAGGGACTCCCAAGTTGCGGACTTAAGTCATTCATACCAGAGTCAACTGAAATGATAATGaggtgtaaacaataaataaataaaaaataaaactttccttgactgggttacaggtgcatagcattggcgacagcgacacaggatattCATTGTTTGCCCTCTGTCACTAACGgacaagttcgcaaactctaacttgaagcactaagACACgtcgtttttttattattctaatTTTTAGTGGGGGGCTGAGAGGAAATTTAGGGGGGCTTGAGCTGTTGGGCCATaaagcagtccctccagaaaaacgcgattatgcgatcgcataattcaatgcataatcaaaatcaaattttttcaaatacgctgcataaattgccgatttccgcgcaaaatatgcggggcttgcatgatttcataatccctgcattttcgttgcaaaaaaagtcccatatatcttagcagaaagttgaaaatgtttgcgtttacttcacacaagagcagccatttccccgttgccatgggaacgttatgaagtgacgtaattacgcgacgtgaacatcatcgaaaagcagggtgttggagaatcactttttttcccccctctttttaatcaaactgcagtttccctcaacttttgcaagttcccgcaatttcattgcataaaattgcataaatatcccgcatattccatcgcatttttttttttatatttcatatattttatatttcatatttcacATAGTTTATGTGTTTACATTGTTGAGGGATGAGTGAGCAACCTTTGGAGAGTCTTGTATGAGtgaatgttttgtttgtatgaGTCATGTATTTTTGCACTTACTATTATTGTAAAGTAAGTTGTTGTTCTTTATTGTTGTTgtcctttttgtgtgttttgttttttgttttctgattgACTGCCGCTGTAAGGTCTATGTCAATTCTGTATTTGAACTagaggaccccctcgaaaacgagatggttcatctcaaggggttattcctcatcaataaatgtcaaaaaaaatgttaagaaaacgtgccgcattatcaaggatttttgcccgcaataatcacaaaaaaacctccgcatttttctggaaggactgataaaGGAAGGGATCCCCGAATACAGCAAGAACTAACCTATCCTCCATGTTGTTTTGGCGCTTCTGTCCGAATCCCGTCAAGCAAAGAGCTCTGACGCGCTGTTCCAGGGTTGGGGATTGCGTCAACAAAATACAGAATAGCCAAAAAAAATGTGGAACAAGTTCTGCAAGATGAtcgagtaaaaaaaaacaacaaccttggAGTCCTCCATGGAATAATCTGGGCCCAAGTCTGAGTTTTCAATATTCATGTCAGAAGTCACTACAACACTGCAATGGGGACGCAGCTAACGCCTTGAGCTCTGGATCATTAACTGTGATGCCACGACGCCTGGACGGAACAACCTAAACCAGGAAAAGTGCAGCCACAGTTTTCCCTGAGCACTTCTGAACTGGGTGCAGCTTGacggtgcaaaaaaaaaaaaaggcttcttTGGAGGAAGGGGGTGGAGGAAAAGCGGCAGGCGACAGCCTCTCCATCTTGTCTCCACACAAGCCAAATACTCTGAGGACCCACGTGGGAAGCAGTTTGGGGTCTCGAGATGCTCTGTAGCATGTCTTGTAGCCATCTTGAAACTGCACTGCGCTGCTTGTGGCTCCTTAGTTTAGGAAAATCAACCCCCAAGCTGTCGTGTAGTCGCTAACATTCTCAACTGGAGGCAGTTTCCAGCAAATACCTCTATCCTATCCTATTCTAAACCTGCTGCATGTTCcttagtaacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaattttttttttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310762 True 5360 lncRNA 0.39 2 20442667 20454788

Neighbor

gene id symbol gene type direction distance location
ccdc3a ccdc3,LOC102778083 coding upstream 8119 20422837 ~ 20434548 (+)
LOC120553582 phyh coding upstream 66319 20364803 ~ 20376348 (+)
LOC120553583 phyh coding upstream 80147 20355616 ~ 20362520 (+)
elk3 LOC104930592,LOC102779228,LOC102209493,LOC102296588 coding upstream 144581 20287264 ~ 20298086 (+)
plxnc1 NA coding upstream 182239 20212787 ~ 20260428 (+)
nudt5 nudt5 coding downstream 110809 20565597 ~ 20570560 (+)
fbxo18 NA coding downstream 116200 20570988 ~ 20603179 (+)
rbm17 rbm17 coding downstream 188119 20642907 ~ 20655914 (+)
pfkfb3 pfkfb3,LOC102775874,LOC104933238 coding downstream 223261 20678049 ~ 20689946 (+)
ntf3 ntf3 coding downstream 361331 20816119 ~ 20864618 (+)
G228989 NA non-coding upstream 141226 20298734 ~ 20301441 (+)
LOC120553527 NA non-coding upstream 520813 19921100 ~ 19921854 (+)
G228922 NA non-coding upstream 526350 19916115 ~ 19916317 (+)
G228912 NA non-coding upstream 570944 19869393 ~ 19871723 (+)
LOC120553215 NA non-coding upstream 601005 19834007 ~ 19841662 (+)
G229108 cdc123,LOC102776001 non-coding downstream 108275 20563063 ~ 20565180 (+)
G229130 NA non-coding downstream 152444 20607232 ~ 20607530 (+)
G229182 NA non-coding downstream 469160 20923948 ~ 20925059 (+)
G229205 NA non-coding downstream 583160 21037948 ~ 21062435 (+)
G229233 NA non-coding downstream 765660 21220448 ~ 21220812 (+)
ucmaa NA other upstream 51261 20382393 ~ 20391406 (+)
LOC120553418 NA other upstream 217482 20190928 ~ 20225185 (+)
LOC120553749 NA other upstream 269260 20147078 ~ 20173407 (+)
G228924 NA other upstream 457019 19982248 ~ 19985648 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other upstream 536715 19852928 ~ 19905952 (+)
LOC120553023 LOC106946322,LOC103151516,LOC104922640 other downstream 693479 21148267 ~ 21150351 (+)
arid2 arid2 other downstream 922084 21376872 ~ 21429238 (+)
G229423 NA other downstream 1383134 21837922 ~ 21847020 (+)
G229425 NA other downstream 1394423 21849211 ~ 21850601 (+)
G229422 NA other downstream 1403195 21857983 ~ 21859209 (+)

Expression


Co-expression Network