G229062


Basic Information

Item Value
gene id G229062
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20355636 ~ 20357563 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310764
CTCAGTGTCTGTGGGCGACTGGTGAAGGTTTGAGCGTAAGTTGGTACAGCACTCTGAAGAACGAGAAGTCAAGGAAACGACACAAATGTTAACAagtggcagcaaaaactgtcctgtacactgtcctgtgactgcTATGACTGTCCCGAGACAgtcactgtcctgtacactgtcctgtgactccatgactgtcctgtacactgtcctgtgactccatgactgtcctgtacactgtcctgtgactccatgactgtcccgggacagtcggacactgtcctgtacactgtcctatGACTCcaagacactgtcctgtgactccatgactgtcctggtACAGTcagacagtgtctgggagtcacaggacagtgtacaggacactactaacagaacaggacagtttttgctgccactgctgctgcaaATGTTTCAGCTGCCCATGTCCAGGAGTGCTCTGTGGGTCGATGAACTCTCCAACTGGAAAAAAAGGACAGGGAGAGCCACACAAGGTCCACAAAACATACTGATTTATGCTGATTTTATCTTTGAACATCAAAACCTTCAAATAGATTGAAAGCACATATGacctctttatatacagtctacgGTTACCACaatttgaaaagtaaaaaaaaaaatattaatgcaTTCTAAATTTTAATTGAacttatgtatatgtatatgaatAACTTATGACTGACCTAAAAACAGACAGACTAGCCTTTTAAGTTCTTTAAGTTAGCGTCTCCACCAATAGGAATAGGCTGTTCTTGTAGTAAAGAAACCATCTATTTTGTATAATGTATATTTTAGTTTAGCTAGACATGGCTATGCAACTAGACATGCCACAAGAGGTAACTTTACTTTACCAAAAGCAAGGACGAACACGGTCATATAGAGCAATGCAAGAATGGAATGTGCTACCTAACCAAAGTAGGCTATACCAGAAAGCAGTAAATCAGATGTAAACTTTGAAAGTTTAGTTAAGAAATATCTGTTGACTAGAGAAGTTGAGTCGACACATAAACTACATTGGTTGAGGTTAAACAAAATATGAATGTGAGACGTGTCCTGAGAGGGCGAAACAGATGTTTGACGACAGCATGGTGTAACTGACTTAAAAAgtgttaaacattaatatggAATGCCCTGTGACCGCACTAGTGGAGATGTGGCTGTCCTTATCTTATGTGTGTACTTTTGTTGTTATCATATTATTTGTGTTATGAAATGATAATGTATGTTTAGTTTCTGTCTTATAAATTTACTGTTATGTATTGTTTAGGATGGTGGAGACGAGGATCTATATATCCTACGATATAGCTGGATGAAAAACGATATAGTTCGTATTTCTATGGATGAAACACAATTTCAGAACCGTAGCCTACATAACGTCACTGTTACTTAACCTATAAGTGCAAGAAGTAAATTGACGTCAATAAAGCATTCATAAACAATAATAGTTAGCATTAAAAATGACTCCTGTATTGCTCCTCATTTTCCCGGAGGCCTGCAGTACACCGCGGGACCCCGGTCTAGTCTACCAGAGCTGTCCGCCGTTAGGTGCGCAGCAATCGGATAACGTCTTAGCCTGTTCCGCTCTGTGCAGCCCCGAATCCCCCGATGAGCCAACATAAACAAAGCCGAACACAAGGATACAATCGTGGCAGATGATCGTTCAAGGTGATTGATCATCAGTCTGAGTCTTTCCGCAGCCCGAGACATTTTCCCGTCTGGTTACTTTATCCCGGTGTGATCCTGTAGGCTACATATGGATAACTAGAGAAAGTGGGTTAGACGTCTCGTACGTCTCTTACAGGCTACATCCATGGGTTAGGCAAGGGCAaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310764 True 1846 lncRNA 0.42 4 20355636 20357563

Neighbor

gene id symbol gene type direction distance location
hcfc2 hcfc2 coding downstream 69049 20272526 ~ 20286587 (-)
cep83 cep83 coding downstream 83492 20260025 ~ 20272144 (-)
LOC120553419 timp3,LOC103152565 coding downstream 355114 19983479 ~ 20000522 (-)
LOC120553212 fam19a2,LOC103364248 coding downstream 548881 19733066 ~ 19806755 (-)
lrig3 lrig3 coding downstream 786579 19546626 ~ 19569057 (-)
mcm10 mcm10,LOC102783079 coding upstream 36503 20394066 ~ 20409676 (-)
optn optn coding upstream 52632 20410195 ~ 20430496 (-)
camk1da camk1d coding upstream 98112 20455675 ~ 20530744 (-)
LOC120553073 NA coding upstream 179493 20537056 ~ 20544945 (-)
cdc123 cdc123 coding upstream 192471 20550034 ~ 20564985 (-)
G228946 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC106945279 non-coding downstream 449693 19852964 ~ 19905943 (-)
G228947 LOC103152567,LOC106913527,LOC106945279,LOC106922717,LOC102300237 non-coding downstream 473557 19877097 ~ 19882079 (-)
G228949 NA non-coding downstream 496773 19858103 ~ 19858863 (-)
LOC120553214 NA non-coding downstream 637224 19717222 ~ 19718412 (-)
G228885 NA non-coding downstream 786277 19550617 ~ 19569359 (-)
G229071 NA non-coding upstream 24902 20382465 ~ 20391508 (-)
G229076 ccdc3,LOC102778083 non-coding upstream 76592 20434155 ~ 20437536 (-)
G229079 NA non-coding upstream 84757 20442320 ~ 20450128 (-)
G229095 NA non-coding upstream 177722 20535285 ~ 20535597 (-)
G229096 NA non-coding upstream 179010 20536573 ~ 20536801 (-)
cdk17 LOC104930593 other downstream 1009 20301092 ~ 20354627 (-)
rerg rerg other downstream 233243 20066895 ~ 20122393 (-)
etv6 etv6 other downstream 516286 19806814 ~ 19839350 (-)
G228934 fam19a2,LOC103364248 other downstream 548538 19733102 ~ 19807098 (-)
sox5 sox5 other downstream 1085300 19028609 ~ 19270336 (-)
G229199 NA other upstream 600094 20957657 ~ 20958220 (-)
ptprz1b NA other upstream 706128 21063691 ~ 21145533 (-)
slc38a2 slc38a2 other upstream 1103513 21461076 ~ 21474602 (-)
LOC120553090 NA other upstream 1413525 21771088 ~ 21811097 (-)
G229716 NA other upstream 2747197 23104760 ~ 23239573 (-)

Expression


Co-expression Network