G229079


Basic Information

Item Value
gene id G229079
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20442320 ~ 20450128 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310788
AAAAGTCAAAGGCCAGCCCTGTTGCTTACTTTGATTTTAAGTAATTCGAGTAGGCTATATGTAGCTATTGGCTATGTCCTATTGGCTATGTACATTAACTTACCTAGCTAGCAATAGCCTTGTAGGGCTACTTGGAAAGCTAGGTAGCTAACTTAGATTgctttgtgtatatatattgtgacCATTTTATCCCAAACGAGCAAAGGCTAGCACTGTTGCTAACTCTGCTTCCAAGGAAGTCAAGTCCATAGCTATTGGCTATTTTCTTTACTTCTAGGCTACATAGTTAGCGGTGGATGTCATGCTTAATTCTACACATTAATATATTTGCTTTGTTGGCTCAGAATTCTTCTTCTAGTGAACTAGACAAAGATGTGAGTTTACTTATATTGTGAAAGTTTCGGTGTAAACTGTTGCCAAATACTTTAGGAGTCACAATAATAGCATTGTctctcattttctcaaaaggttGTAAGCATTAGTAAATCCAGTGCAAAGCTGCCTTGCTAGCAGCTGTGCTTCGGTCTAGctaatgttaaaaacctcaaGATTTAACTCAATTaatagaagaagaaggagaggaagacaTGCCTTTATTTATCCCGTAAGGGGAAAttcacatttaatttaatgaGAGCAGCTCTGCCTCTGAGAATTGTTTGTAGGACTAAAACTTTATAcagtctgctttttttttgggacCCAGTGTCTCCCTGTGGGTGTCCTCGTCCAGAGCCTGCTGAGTTGTAGCTGGCTGTATTGTATTTACTCTCTGCATGTGACCACAACAAATTCCCATCCTGTGCACCGTCACCACGCCGACGACACCCATGTTTCTCAGAGCGGGCACCGCCTGCCGCACTTATTGTGCTGTGATGAcgattatgatgatgatgatgatgactttCTGTTAATGGGGCTTGTATATCAGATGCCTTCGACAATCATGTGCACATATCAGAGTTACCATGACAACGCAGGGCAGAGCGActgattgtgttttgtttgtctttctccTGGAATAAATCCTGAATGATGGt
>TU310789
AAAAGTCAAAGGCCAGCCCTGTTGCTTACTTTGATTTTAAGTAATTCGAGTAGGCTATATGTAGCTATTGGCTATGTCCTATTGGCTATGTACATTAACTTACCTAGCTAGCAATAGCCTTGTAGGGCTACTTGGAAAGCTAGGTAGCTAACTTAGATTgctttgtgtatatatattgtgacCATTTTATCCCAAACGAGCAAAGGCTAGCACTGTTGCTAACTCTGCTTCCAAGGAAGTCAAGTCCATAGCTATTGGCTATTTTCTTTACTTCTAGGCTACATAGTTAGCGGTGGATGTCATGCTTAATTCTACACATTAATATATTTGCTTTGTTGGCTCAGAATTCTTCTTCTAGTGAACTAGACAAAGATGTGAGTTTACTTATATTGTGAAAGTTTCGGTGTAAACTGTTGCCAAATACTTTAGGAGTCACAATAATAGCATTGTctctcattttctcaaaaggttGTAAGCATTAGTAAATCCAGTGCAAAGCTGCCTTGCTAGCAGCTGTGCTTCGGTCTAGctaatgttaaaaacctcaaGATTTAACTCAATTaatagaagaagaaggagaggaagacaTGCCTTTATTTATCCCGTAAGGGGAAAttcacatttaatttaatgaGAGCAGCTCTGCCTCTGAGAATTGTTTGTAGGACTAAAACTTTATAcagtctgctttttttttgggacCCAGTGTCTCCCTGTGGGTGTCCTCGTCCAGAGCCTGCTGAGTTGTAGCTGGCTGTATTGTATTTACTCTCTGCATGTGACCACAACAAATTCCCATCCTGTGCACCGTCACCACGCCGACGACACCCATGTTTCTCAGAGCGGGCACCGCCTGCCGCACTTATTGTGCTGTGATGAcgattatgatgatgatgatgatgatgatgatgatgactttCTGTTAATGGGGCTTGTATATCAGATGCCTTCGACAATCATGTGCACATATCAGAGTTACCATGACAACGCAGGGCAGAGCGActgattgtgttttgtttgtctttctccTGGAATAAATCCTGAATGATGGt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310788 False 1040 lncRNA 0.41 2 20442320 20450128
TU310789 True 1052 lncRNA 0.41 2 20442320 20450128

Neighbor

gene id symbol gene type direction distance location
optn optn coding downstream 11824 20410195 ~ 20430496 (-)
mcm10 mcm10,LOC102783079 coding downstream 32644 20394066 ~ 20409676 (-)
hcfc2 hcfc2 coding downstream 155733 20272526 ~ 20286587 (-)
cep83 cep83 coding downstream 170176 20260025 ~ 20272144 (-)
LOC120553419 timp3,LOC103152565 coding downstream 441798 19983479 ~ 20000522 (-)
camk1da camk1d coding upstream 5547 20455675 ~ 20530744 (-)
LOC120553073 NA coding upstream 86928 20537056 ~ 20544945 (-)
cdc123 cdc123 coding upstream 99906 20550034 ~ 20564985 (-)
il15ra NA coding upstream 170417 20620545 ~ 20640722 (-)
ano2b ano2,LOC103459666,LOC108245555,LOC102202227 coding upstream 475045 20925173 ~ 21008235 (-)
G229076 ccdc3,LOC102778083 non-coding downstream 4784 20434155 ~ 20437536 (-)
G229071 NA non-coding downstream 50812 20382465 ~ 20391508 (-)
G229062 NA non-coding downstream 84757 20355636 ~ 20357563 (-)
G228946 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC106945279 non-coding downstream 536377 19852964 ~ 19905943 (-)
G229095 NA non-coding upstream 85157 20535285 ~ 20535597 (-)
G229096 NA non-coding upstream 86445 20536573 ~ 20536801 (-)
G229098 NA non-coding upstream 91060 20541188 ~ 20542936 (-)
G229099 NA non-coding upstream 96765 20546893 ~ 20547497 (-)
G229109 NA non-coding upstream 99370 20549498 ~ 20549724 (-)
cdk17 LOC104930593 other downstream 87693 20301092 ~ 20354627 (-)
rerg rerg other downstream 319927 20066895 ~ 20122393 (-)
etv6 etv6 other downstream 602970 19806814 ~ 19839350 (-)
G228934 fam19a2,LOC103364248 other downstream 635222 19733102 ~ 19807098 (-)
sox5 sox5 other downstream 1171984 19028609 ~ 19270336 (-)
G229199 NA other upstream 507529 20957657 ~ 20958220 (-)
ptprz1b NA other upstream 613563 21063691 ~ 21145533 (-)
slc38a2 slc38a2 other upstream 1010948 21461076 ~ 21474602 (-)
LOC120553090 NA other upstream 1320960 21771088 ~ 21811097 (-)
G229716 NA other upstream 2654632 23104760 ~ 23239573 (-)

Expression


Co-expression Network