G229098


Basic Information

Item Value
gene id G229098
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20541188 ~ 20542936 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310811
ctcatcaaagtagccccctttggcagatataacagctgaacacactcgtggcattctttctacgatggaaatcaaatattcttcagaaagttcttcccaactctgttgcagaaattcccataaatgtgtggcacttgtaggttgctttgctttcacttttctgtccagttcatcccaaaccagctcaatggggtttaagtctggtgactgtgctggtcactccatgtttttaagcttaccatcttgttcttttttgctaaggtagttctggcatagattggacttatgttttgggtcattatcttgctgtaggatgaacccctgaccaactaggcgcataccagagggtactgcatggcgctgcaaaatgctgtggtagccattttggttcagggtgcctttcactctgtacaaatcaccgaccctggatccagcaaaacagccccagaccatcacgcttcctcctcgaTGTtagacagttgatgtcacagaCAGAGGAACCATCTTTTCGCCTACTTGACGGCGtgcaaaaatcctgcgtgatgaaccgaagatttcaaattttgattcatcagtccatactCCATAACACCTTCATCCAGTCTTTAGTAGTCCATTGCCAGTGTTTCTTGGTCCAGGCAAGCCTCTtcttcttattctgacgtctcagcaatggctttcttgctgcaactcgacctatcaaacctgcagctccaagtcttctctttacagttgaaactgagacttgcttattccgaccactattaagctgtacttgaagctgttgtcctgtgagctgcctatcacgcaagctgttgactctcagaaacttgtcttctgattctgttgtggctttgggtctgccagacctcttcctgtcagagtttcccccagtttctaagtgacatttgatggtgaagaatactgtactcaccgACATCTTGACTTTCtacgcaatttctctgtaggaaagaccaacattcttaagtgttatggtggtctgtctctcttccattgttaattgcctttttcccgccatttttatagcaacacactactttctgcagtacaatactgttcaaataatgctcacgagggtacggtaccacagtgtgttccaacaatacttttatacaaacagagggggttgtaagtaatccagacaagtttgaacacctgtgggaattggtagcagcaactttcaaagcttgatcaacctccattgctgcagaacagctttacagtgactacgtttacaagctgtcaattttcgggttatggtcgggttaaggtcactattcgggtttctgaaacattcggaataacccgtttacatgcgtgagcagagagagttactcctgtatacacggaatttgtaatcaattggcgatatcccgatgtaaacggcgacgcacggttagcgtctggacgtacggacaaaccctgcttcgcgtaacttttcggtcacctttttataaatctcactatctcggtactttctgccgtcaacaaaagacattatattcatggttttcaccacactaatgaagaaattggtttcctcctcgctccaaaagtgtggtgctgtgctgcgtctcgccatgtttacctctacttcttgtttacttccggtatactgcgcgcaggttttctggcgcatacaagaagttcctctactcaaaagacgaTTCCTTGCGaacagaacacaaatcaatgttccttttgatgggcatatgccgatacgcgttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310811 True 1749 lncRNA 0.44 1 20541188 20542936

Neighbor

gene id symbol gene type direction distance location
camk1da camk1d coding downstream 10444 20455675 ~ 20530744 (-)
optn optn coding downstream 110692 20410195 ~ 20430496 (-)
mcm10 mcm10,LOC102783079 coding downstream 131512 20394066 ~ 20409676 (-)
hcfc2 hcfc2 coding downstream 254601 20272526 ~ 20286587 (-)
cep83 cep83 coding downstream 269044 20260025 ~ 20272144 (-)
cdc123 cdc123 coding upstream 7098 20550034 ~ 20564985 (-)
il15ra NA coding upstream 77609 20620545 ~ 20640722 (-)
ano2b ano2,LOC103459666,LOC108245555,LOC102202227 coding upstream 382237 20925173 ~ 21008235 (-)
pik3cg pik3cg coding upstream 479399 21022335 ~ 21046386 (-)
slc13a4 slc13a4 coding upstream 610265 21153201 ~ 21183856 (-)
G229096 NA non-coding downstream 4387 20536573 ~ 20536801 (-)
G229095 NA non-coding downstream 5591 20535285 ~ 20535597 (-)
G229079 NA non-coding downstream 91060 20442320 ~ 20450128 (-)
G229076 ccdc3,LOC102778083 non-coding downstream 103652 20434155 ~ 20437536 (-)
G229071 NA non-coding downstream 149680 20382465 ~ 20391508 (-)
G229099 NA non-coding upstream 3957 20546893 ~ 20547497 (-)
G229109 NA non-coding upstream 6562 20549498 ~ 20549724 (-)
G229140 NA non-coding upstream 83143 20626079 ~ 20627508 (-)
G229154 NA non-coding upstream 125722 20668658 ~ 20668886 (-)
G229162 pfkfb3 non-coding upstream 138156 20681092 ~ 20683865 (-)
cdk17 LOC104930593 other downstream 186561 20301092 ~ 20354627 (-)
rerg rerg other downstream 418795 20066895 ~ 20122393 (-)
etv6 etv6 other downstream 701838 19806814 ~ 19839350 (-)
G228934 fam19a2,LOC103364248 other downstream 734090 19733102 ~ 19807098 (-)
sox5 sox5 other downstream 1270852 19028609 ~ 19270336 (-)
G229199 NA other upstream 414721 20957657 ~ 20958220 (-)
ptprz1b NA other upstream 520755 21063691 ~ 21145533 (-)
slc38a2 slc38a2 other upstream 918140 21461076 ~ 21474602 (-)
LOC120553090 NA other upstream 1228152 21771088 ~ 21811097 (-)
G229716 NA other upstream 2561824 23104760 ~ 23239573 (-)

Expression


Co-expression Network