Gene
RNA
| Item | Value |
|---|---|
| gene id | G229109 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 20549498 ~ 20549724 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | description |
|---|---|
| ko00830 | Retinol metabolism |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU310822 | True | 227 | lncRNA | 0.47 | 1 | 20549498 | 20549724 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120553073 | NA | coding | downstream | 4553 | 20537056 ~ 20544945 (-) |
| camk1da | camk1d | coding | downstream | 18754 | 20455675 ~ 20530744 (-) |
| optn | optn | coding | downstream | 119002 | 20410195 ~ 20430496 (-) |
| mcm10 | mcm10,LOC102783079 | coding | downstream | 139822 | 20394066 ~ 20409676 (-) |
| hcfc2 | hcfc2 | coding | downstream | 262911 | 20272526 ~ 20286587 (-) |
| cdc123 | cdc123 | coding | upstream | 310 | 20550034 ~ 20564985 (-) |
| il15ra | NA | coding | upstream | 70821 | 20620545 ~ 20640722 (-) |
| ano2b | ano2,LOC103459666,LOC108245555,LOC102202227 | coding | upstream | 375449 | 20925173 ~ 21008235 (-) |
| pik3cg | pik3cg | coding | upstream | 472611 | 21022335 ~ 21046386 (-) |
| slc13a4 | slc13a4 | coding | upstream | 603477 | 21153201 ~ 21183856 (-) |
| G229099 | NA | non-coding | downstream | 2001 | 20546893 ~ 20547497 (-) |
| G229098 | NA | non-coding | downstream | 6562 | 20541188 ~ 20542936 (-) |
| G229096 | NA | non-coding | downstream | 12697 | 20536573 ~ 20536801 (-) |
| G229095 | NA | non-coding | downstream | 13901 | 20535285 ~ 20535597 (-) |
| G229079 | NA | non-coding | downstream | 99370 | 20442320 ~ 20450128 (-) |
| G229140 | NA | non-coding | upstream | 76355 | 20626079 ~ 20627508 (-) |
| G229154 | NA | non-coding | upstream | 118934 | 20668658 ~ 20668886 (-) |
| G229162 | pfkfb3 | non-coding | upstream | 131368 | 20681092 ~ 20683865 (-) |
| G229166 | NA | non-coding | upstream | 152987 | 20702711 ~ 20703069 (-) |
| LOC120553789 | NA | non-coding | upstream | 226679 | 20776403 ~ 20855266 (-) |
| cdk17 | LOC104930593 | other | downstream | 194871 | 20301092 ~ 20354627 (-) |
| rerg | rerg | other | downstream | 427105 | 20066895 ~ 20122393 (-) |
| etv6 | etv6 | other | downstream | 710148 | 19806814 ~ 19839350 (-) |
| G228934 | fam19a2,LOC103364248 | other | downstream | 742400 | 19733102 ~ 19807098 (-) |
| sox5 | sox5 | other | downstream | 1279162 | 19028609 ~ 19270336 (-) |
| G229199 | NA | other | upstream | 407933 | 20957657 ~ 20958220 (-) |
| ptprz1b | NA | other | upstream | 513967 | 21063691 ~ 21145533 (-) |
| slc38a2 | slc38a2 | other | upstream | 911352 | 21461076 ~ 21474602 (-) |
| LOC120553090 | NA | other | upstream | 1221364 | 21771088 ~ 21811097 (-) |
| G229716 | NA | other | upstream | 2555036 | 23104760 ~ 23239573 (-) |
